RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ZNF92Q03936 586 aa7.09□□□□□ -1.28
SMG1-202ENST00000446231 DAZLQ92904 295 aaKnown RBP7.09□□□□□ -1.28
SMG1-202ENST00000446231 TXNIPQ9H3M7 391 aa7.09□□□□□ -1.28
SMG1-202ENST00000446231 FKRPQ9H9S5 495 aa7.09□□□□□ -1.28
SMG1-202ENST00000446231 ITGBL1O95965 494 aaPredicted RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 FOLR2P14207 255 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 PPICP45877 212 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 PPP1CBP62140 327 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 PLCXD3Q63HM9 321 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ABHD6Q9BV23 337 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 NXF5Q9H1B4 397 aaKnown RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 DNAJC5Q9H3Z4 198 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 WDR38Q5JTN6 314 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 Q7L0L9 218 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 A0A1B0GTH9 108 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 RPL27P61353 136 aaKnown RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 CEBPEQ15744 281 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 METRNLQ641Q3 311 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ADPRHL1Q8NDY3 354 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 LAT2Q9GZY6 243 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 HIVEP3Q5T1R4 2406 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 HTR3DQ70Z44 454 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ONECUT2O95948 504 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 CCNOP22674 350 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ZNF133P52736 654 aaPredicted RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 ALKBH2Q6NS38 261 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 SERTAD3Q9UJW9 196 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ZNF43P17038 809 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 TRMT12Q53H54 448 aaKnown RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 GKN2Q86XP6 184 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 MS4A6EQ96DS6 147 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ARHGAP5-AS1Q96IT6 56 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ASB16Q96NS5 453 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 WASHC3Q9Y3C0 194 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ELNP15502 786 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 EOGTQ5NDL2 527 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ZNF738Q8NE65 137 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 OR8B4Q96RC9 309 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 HSF4Q9ULV5 492 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 FCARP24071 287 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 SULT1A2P50226 295 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 GRB2P62993 217 aaKnown RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 PARS2Q7L3T8 475 aaKnown RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 OR51E1Q8TCB6 317 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 TBX15Q96SF7 602 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 BLKP51451 505 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ZNF154Q13106 437 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 SLC36A1Q7Z2H8 476 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ZSCAN4Q8NAM6 433 aaPredicted RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 ZNF331Q9NQX6 463 aaPredicted RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 PKD1L3Q7Z443 1732 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 B4DGG1 531 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 SCAND1P57086 179 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 FAM78BQ5VT40 261 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 C5P01031 1676 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 Q9N2K0 584 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 NAT8Q9UHE5 227 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 OPN1LWP04000 364 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 OR5AC1P0C628 307 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 KLK2P20151 261 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 FHITP49789 147 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 PCBD1P61457 104 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 BTNL8Q6UX41 500 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 STARD4Q96DR4 205 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 PISDQ9UG56 409 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 ST6GALNAC2Q9UJ37 374 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 TAF1P21675 1872 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 TMED7-TICAM2A0A0A6YYA0 188 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 FAM166BA8MTA8 275 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 RPS27P42677 84 aaKnown RBP7.08□□□□□ -1.28
SMG1-202ENST00000446231 CARD18P57730 90 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 OTPQ5XKR4 325 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 OR52N4Q8NGI2 321 aa7.08□□□□□ -1.28
SMG1-202ENST00000446231 COLCA2A8K830 154 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 PPM1DO15297 605 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 DBHP09172 617 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 HIST1H1BP16401 226 aaKnown RBP7.07□□□□□ -1.28
SMG1-202ENST00000446231 TIGITQ495A1 244 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 FAM162BQ5T6X4 162 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 MED25Q71SY5 747 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 TCTEX1D1Q8N7M0 179 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 SPACA5Q96QH8 159 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 ATP5SQ99766 215 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 CUTCQ9NTM9 273 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 DSPPQ9NZW4 1301 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 ZNF814B7Z6K7 855 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 UBE2CO00762 179 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 CD1AP06126 327 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 P2RY1P47900 373 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 GLIPR1P48060 266 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 MORN1Q5T089 497 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 OR4A47Q6IF82 309 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 OTOSQ8NHW6 89 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 TSACCQ96A04 125 aaPredicted RBP7.07□□□□□ -1.28
SMG1-202ENST00000446231 SPSB2Q99619 263 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 ZFYVE21Q9BQ24 234 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 CBLN4Q9NTU7 201 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 ADAM20O43506 726 aa7.07□□□□□ -1.28
SMG1-202ENST00000446231 OR7C1O76099 320 aaPredicted RBP7.07□□□□□ -1.28
SMG1-202ENST00000446231 USF1P22415 310 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms