RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 BTBD17A6NE02 478 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 TTRP02766 147 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 CHATP28329 748 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HSD11B1P28845 292 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 SNU13P55769 128 aaKnown RBP12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 C4orf17Q53FE4 359 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
VPS52-212ENST00000445902 VAX1Q5SQQ9 334 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 C1orf140Q5VVS0 124 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 PLXDC2Q6UX71 529 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 C1QL4Q86Z23 238 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 ZNF610Q8N9Z0 462 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 GPR119Q8TDV5 335 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 ELSPBP1Q96BH3 223 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 NXF5Q9H1B4 397 aaKnown RBP12.35□□□□□ -0.43
VPS52-212ENST00000445902 PPP4R1LQ9P1A2 415 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 HS3ST3B1Q9Y662 390 aa12.35□□□□□ -0.43
VPS52-212ENST00000445902 CPAMD8Q8IZJ3 1885 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 TMEM14DPA8MWL7 114 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 H0YIG0 161 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 KAT7O95251 611 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 F10P00742 488 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 GAPDHP04406 335 aaKnown RBP12.34□□□□□ -0.43
VPS52-212ENST00000445902 LSM6P62312 80 aaKnown RBP12.34□□□□□ -0.43
VPS52-212ENST00000445902 SP6Q3SY56 376 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 CYB5R2Q6BCY4 276 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 MAMDC2Q7Z304 686 aaPredicted RBP12.34□□□□□ -0.43
VPS52-212ENST00000445902 PEG10Q86TG7 708 aaKnown RBP12.34□□□□□ -0.43
VPS52-212ENST00000445902 PHOSPHO2Q8TCD6 241 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 YPEL4Q96NS1 127 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 GAL3ST4Q96RP7 486 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 TCEAL2Q9H3H9 227 aaPredicted RBP12.34□□□□□ -0.43
VPS52-212ENST00000445902 MED12Q93074 2177 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 LINC01553A4QN01 128 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 CYB5BO43169 146 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 TRGC2P03986 189 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 ISG15P05161 165 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 QDPRP09417 244 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 TAGLN2P37802 199 aaKnown RBP12.34□□□□□ -0.43
VPS52-212ENST00000445902 CCL20P78556 96 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 REC114Q7Z4M0 266 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 C19orf47Q8N9M1 422 aaKnown RBP12.34□□□□□ -0.43
VPS52-212ENST00000445902 OR51E1Q8TCB6 317 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 NPRL2Q8WTW4 380 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 MISP3Q96FF7 219 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 TCTN2Q96GX1 697 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 REEP6Q96HR9 211 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 B3GALT5Q9Y2C3 310 aa12.34□□□□□ -0.43
VPS52-212ENST00000445902 H0YL77 283 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 CDC14BO60729 498 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 CRABP1P29762 137 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 ERVFRD-1P60508 538 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 ACY1Q03154 408 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.33□□□□□ -0.43
VPS52-212ENST00000445902 GGNBP1Q5YKI7 109 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 SPRED2Q7Z698 418 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.43
VPS52-212ENST00000445902 AVL9Q8NBF6 648 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 RAB39BQ96DA2 213 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 GPER1Q99527 375 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 TXNIPQ9H3M7 391 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.43
VPS52-212ENST00000445902 ZNF701Q9NV72 531 aaPredicted RBP12.33□□□□□ -0.43
VPS52-212ENST00000445902 OSGIN2Q9Y236 505 aa12.33□□□□□ -0.43
VPS52-212ENST00000445902 TRAV36DV7A0A075B6V5 113 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 A8MVM7 634 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 RNH1P13489 461 aaKnown RBP12.33□□□□□ -0.44
VPS52-212ENST00000445902 ANOS1P23352 680 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 TM4SF4P48230 202 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 USF2Q15853 346 aaPredicted RBP12.33□□□□□ -0.44
VPS52-212ENST00000445902 HAGHQ16775 308 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 DBX2Q6ZNG2 339 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 OR14K1Q8NGZ2 314 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 C14orf166Q9Y224 244 aaKnown RBP12.33□□□□□ -0.44
VPS52-212ENST00000445902 CDRT15L2A8MXV6 281 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 ZNF878C9JN71 531 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 TERTO14746 1132 aaKnown RBP12.33□□□□□ -0.44
VPS52-212ENST00000445902 PPP1R2P9O14990 202 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 HCKP08631 526 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 ZNF20P17024 532 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 CASP6P55212 293 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 TAS2R60P59551 318 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 NHLH2Q02577 135 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 GPM6BQ13491 265 aa12.33□□□□□ -0.44
VPS52-212ENST00000445902 TMEM31Q5JXX7 168 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms