RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 CBX5P45973 191 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 FAM3AP98173 230 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 MALLQ13021 153 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 SLC22A6Q4U2R8 563 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 C9orf135Q5VTT2 229 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 FAM89BQ8N5H3 189 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 CPEB3Q8NE35 698 aaKnown RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 OR51S1Q8NGJ8 323 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 OR8S1Q8NH09 359 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 PIGTQ969N2 578 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 APOBEC3DQ96AK3 386 aaPredicted RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 BORCS8Q96FH0 119 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 SELENOIQ9C0D9 397 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 ZMAT3Q9HA38 289 aaKnown RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■■■ 54.7
SNX13-204ENST00000444712 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 GPR173Q9NS66 373 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 KLK13Q9UKR3 277 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 FLVCR2Q9UPI3 526 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 SLC7A11Q9UPY5 501 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 PLEKHA6Q9Y2H5 1048 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 CFAP54Q96N23 3096 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 ZNF780AO75290 641 aaPredicted RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 SULT1A3P0DMM9 295 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 SULT1A4P0DMN0 295 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 CD79AP11912 226 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 HIST1H1DP16402 221 aaKnown RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 CPT2P23786 658 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
SNX13-204ENST00000444712 RBP2P50120 134 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 MTCP1P56278 107 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 TMEM104Q8NE00 496 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 OR1K1Q8NGR3 316 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 TM2D1Q9BX74 207 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 ZNF222Q9UK12 451 aa13.63□□□□□ -0.23
SNX13-204ENST00000444712 EP300Q09472 2414 aaPredicted RBP13.62□□□□□ -0.23
SNX13-204ENST00000444712 HLA-HP01893 362 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 MGMTP16455 207 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 MPZP25189 248 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 GZMKP49863 264 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 RAB1AP62820 205 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 ZNF92Q03936 586 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 ACTBL2Q562R1 376 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 RNASE10Q5GAN6 216 aaKnown RBP13.62□□□□□ -0.23
SNX13-204ENST00000444712 IGFL3Q6UXB1 125 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 RNF144BQ7Z419 303 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 CCDC36Q8IYA8 594 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 OR51T1Q8NGJ9 327 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 CCDC107Q8WV48 283 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 HYLS1Q96M11 299 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 PRRT1Q99946 306 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 NICN1Q9BSH3 213 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 METTL9Q9H1A3 318 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 BANF2Q9H503 90 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 RANBP3Q9H6Z4 567 aaPredicted RBP13.62□□□□□ -0.23
SNX13-204ENST00000444712 C12orf49Q9H741 205 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 PCDHB16Q9NRJ7 776 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 SLC2A8Q9NY64 477 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 B3GNT2Q9NY97 397 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 PRSS50Q9UI38 385 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 A0A0C4DFX4 3053 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
SNX13-204ENST00000444712 UBE2QL1A1L167 161 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 FAM172BPA6NC97 362 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 AMY2AP04746 511 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 EDN3P14138 238 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 GNB3P16520 340 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 FUT6P51993 359 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 ATP1B3P54709 279 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 TGFBR3Q03167 851 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 ZNF169Q14929 603 aaPredicted RBP13.61□□□□□ -0.23
SNX13-204ENST00000444712 PPA1Q15181 289 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 CRIP3Q6Q6R5 217 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 OR11H7Q8NGC8 314 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 OR4D10Q8NGI6 311 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 OR5D18Q8NGL1 313 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 DVL3Q92997 716 aaPredicted RBP13.61□□□□□ -0.23
SNX13-204ENST00000444712 CMBLQ96DG6 245 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 ALX4Q9H161 411 aaPredicted RBP13.61□□□□□ -0.23
SNX13-204ENST00000444712 WIPF3A6NGB9 483 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 CA11O75493 328 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 CNOT4O95628 575 aaKnown RBP13.61□□□□□ -0.23
SNX13-204ENST00000444712 SERPINA2P20848 420 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 APLNRP35414 380 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 ZP1P60852 638 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 TNK1Q13470 666 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 ZNF626Q68DY1 528 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 FTMTQ8N4E7 242 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 BPIFB2Q8N4F0 458 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 BEST4Q8NFU0 473 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 CAPSLQ8WWF8 208 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 BEX1Q9HBH7 125 aa13.61□□□□□ -0.23
SNX13-204ENST00000444712 MYO7BQ6PIF6 2116 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 TNRC6AQ8NDV7 1962 aaKnown RBP13.6□□□□□ -0.23
SNX13-204ENST00000444712 LOC100509620A0A075B734 347 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 MEIKINA0A087WXM9 373 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 A0A0A6YYD4 124 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 C5orf49A4QMS7 147 aa13.6□□□□□ -0.23
SNX13-204ENST00000444712 PYCARD-AS1I3L0S3 204 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms