RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 ARMC10Q8N2F6 343 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 OR51T1Q8NGJ9 327 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 PP6455Q8WZ26 134 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 ZNF75AQ96N20 296 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 SRXN1Q9BYN0 137 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 CHST5Q9GZS9 411 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 PPA2Q9H2U2 334 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 HPF1Q9NWY4 346 aa14.04□□□□□ -0.16
SHQ1-202ENST00000444040 NSG1A0A0A6YYJ2 146 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 EEF1E1-BLOC1S5C9J1V9 151 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 TNFSF11O14788 317 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 CBR3O75828 277 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 CRHP06850 196 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 DBHP09172 617 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 CBX5P45973 191 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 NPY4RP50391 375 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 FAM74A1Q5RGS3 127 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 MOB3CQ70IA8 216 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 PXT1Q8NFP0 134 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 FBXO17Q96EF6 278 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 BARX1Q9HBU1 254 aaPredicted RBP14.03□□□□□ -0.16
SHQ1-202ENST00000444040 M0R135 149 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 SERPINF1P36955 418 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 ARFRP1Q13795 201 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 C20orf196Q8IYI0 205 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 MAML2Q8IZL2 1156 aaPredicted RBP14.03□□□□□ -0.16
SHQ1-202ENST00000444040 THAP6Q8TBB0 222 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 INTS12Q96CB8 462 aaKnown RBP14.03□□□□□ -0.16
SHQ1-202ENST00000444040 ZNF799Q96GE5 643 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 MBD2Q9UBB5 411 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 FLVCR1Q9Y5Y0 555 aa14.03□□□□□ -0.16
SHQ1-202ENST00000444040 RSPO4Q2I0M5 234 aaPredicted RBP14.02□□□□□ -0.16
SHQ1-202ENST00000444040 FAM27BQ5VT28 67 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 AADACL3Q5VUY0 350 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.02□□□□□ -0.16
SHQ1-202ENST00000444040 OR10K1Q8NGX5 313 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 HAS2Q92819 552 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 PIGQQ9BRB3 760 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 TM2D1Q9BX74 207 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 ULBP2Q9BZM5 246 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 PIGLQ9Y2B2 252 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 PCDHGA1Q9Y5H4 931 aa14.02□□□□□ -0.16
SHQ1-202ENST00000444040 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 PDGFBP01127 241 aaPredicted RBP14.02□□□□□ -0.17
SHQ1-202ENST00000444040 FPR2P25090 351 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 B3GALT5-AS1P59052 145 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 STPG2Q8N412 459 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 OR5H2Q8NGV7 314 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 OR13G1Q8NGZ3 307 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 PHYHIPLQ96FC7 376 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 RTBDNQ9BSG5 229 aaPredicted RBP14.02□□□□□ -0.17
SHQ1-202ENST00000444040 ZNF471Q9BX82 626 aaPredicted RBP14.02□□□□□ -0.17
SHQ1-202ENST00000444040 PECRQ9BY49 303 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 NMES1Q9C002 83 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 PLEK2Q9NYT0 353 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 OSGIN2Q9Y236 505 aa14.02□□□□□ -0.17
SHQ1-202ENST00000444040 C5orf51A6NDU8 294 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 SFT2D2O95562 160 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 FCGR2AP12318 317 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 AMY2BP19961 511 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 PSMB6P28072 239 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 BLVRBP30043 206 aaPredicted RBP14.01□□□□□ -0.17
SHQ1-202ENST00000444040 SUPT4H1P63272 117 aaKnown RBP14.01□□□□□ -0.17
SHQ1-202ENST00000444040 MRPS34P82930 218 aaKnown RBP14.01□□□□□ -0.17
SHQ1-202ENST00000444040 SNAI3Q3KNW1 292 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 C10orf35Q96D05 121 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 ST6GALNAC5Q9BVH7 336 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 CHMP1AQ9HD42 196 aaPredicted RBP14.01□□□□□ -0.17
SHQ1-202ENST00000444040 TRBV6-7A0A0A0MS04 114 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 HPNP05981 417 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 SERPINA2P20848 420 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 NTF4P34130 210 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 DUSP3P51452 185 aaPredicted RBP14.01□□□□□ -0.17
SHQ1-202ENST00000444040 ZNF84P51523 738 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 CLEC18BQ6UXF7 455 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 CDX2Q99626 313 aaPredicted RBP14.01□□□□□ -0.17
SHQ1-202ENST00000444040 SF3B5Q9BWJ5 86 aaKnown RBP14.01□□□□□ -0.17
SHQ1-202ENST00000444040 DNTTIP1Q9H147 329 aa14.01□□□□□ -0.17
SHQ1-202ENST00000444040 C13orf42A0A1B0GVH6 325 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 APOC1P02654 83 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 GP1BAP07359 652 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 CRYGSP22914 178 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 FOLR3P41439 243 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SNU13P55769 128 aaKnown RBP14□□□□□ -0.17
SHQ1-202ENST00000444040 RAC3P60763 192 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SGK3Q96BR1 496 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 ZNF775Q96BV0 537 aaPredicted RBP14□□□□□ -0.17
SHQ1-202ENST00000444040 MRPS24Q96EL2 167 aaKnown RBP14□□□□□ -0.17
SHQ1-202ENST00000444040 RNF126Q9BV68 326 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 A0A0B4J2A0 478 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 KCNAB3O43448 404 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 MTRF1O75570 445 aaKnown RBP14□□□□□ -0.17
SHQ1-202ENST00000444040 PI3P19957 117 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 INO80EQ8NBZ0 244 aaPredicted RBP14□□□□□ -0.17
SHQ1-202ENST00000444040 CCDC54Q8NEL0 328 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 PIGTQ969N2 578 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 SHPKQ9UHJ6 478 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 DMDP11532 3685 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 A0A0G2JMM0 328 aa14□□□□□ -0.17
SHQ1-202ENST00000444040 A0A1W2PPB8 328 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms