RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 LGI3Q8N145 548 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 OR5T1Q8NG75 326 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 RNASEH2CQ8TDP1 164 aaKnown RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 LINC00615Q96LM1 132 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF558Q96NG5 402 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 PARD6AQ9NPB6 346 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 TRBV23OR9-2A0A075B6M9 112 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 FGF5P12034 268 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ECI1P42126 302 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF41P51814 821 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 ACOT6Q3I5F7 207 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 KTI12Q96EK9 354 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 TMEM59Q9BXS4 323 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SPHK2Q9NRA0 654 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 CCL26Q9Y258 94 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 INSL5Q9Y5Q6 135 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ARHGEF17Q96PE2 2063 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 SCN8AQ9UQD0 1980 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ATG2BQ96BY7 2078 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 AMBPP02760 352 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 RPS27P42677 84 aaKnown RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 POLR2HP52434 150 aaKnown RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF266Q14584 549 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 JOSD1Q15040 202 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 ADIRFQ15847 76 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 NUP54Q7Z3B4 507 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ANKRD9Q96BM1 317 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 GINS3Q9BRX5 216 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 H0YGG7 62 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 OR5AC1P0C628 307 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ARF3P61204 181 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 LMLNQ96KR4 655 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 RTBDNQ9BSG5 229 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 CBLN4Q9NTU7 201 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 AK3Q9UIJ7 227 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SIPA1L1O43166 1804 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 FANCMQ8IYD8 2048 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 CCL16O15467 120 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 RPS4Y1P22090 263 aaKnown RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 DUSP1P28562 367 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SRPXP78539 464 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 TMEM268Q5VZI3 342 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 BHLHE23Q8NDY6 225 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 EXTL1Q92935 676 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 OR8B4Q96RC9 309 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ABHD6Q9BV23 337 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 PLEKHF2Q9H8W4 249 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 HCSTQ9UBK5 93 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 LDB3O75112 727 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 BLVRBP30043 206 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 IDH3GP51553 393 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 PMS2P11Q13670 270 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ARL6IP1Q15041 203 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF74Q16587 644 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ZNF880Q6PDB4 577 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 SIAH2O43255 324 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 MMP16P51512 607 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 OOSP2Q86WS3 158 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 GPBAR1Q8TDU6 330 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 GNPNAT1Q96EK6 184 aaPredicted RBP4.48□□□□□ -1.69
HERC1-201ENST00000443617 DEC1Q9P2X7 70 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 NAGKQ9UJ70 344 aa4.48□□□□□ -1.69
HERC1-201ENST00000443617 ACKR1Q16570 336 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 UNQ6494/PRO21346Q6UXR6 183 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 SMIM15Q7Z3B0 74 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 BCORP1Q8N888 145 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 OR14L1PQ8NHC6 308 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 FRZBQ92765 325 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 SHDQ96IW2 340 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 SCN5AQ14524 2016 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 CASP8AP2Q9UKL3 1982 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 A0A1W2PRU2 124 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ELAVL3Q14576 367 aaKnown RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 TOMM20LQ6UXN7 152 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 PARS2Q7L3T8 475 aaKnown RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 ARHGAP5-AS1Q96IT6 56 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 CNTD2Q9H8S5 307 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 PLEKHJ1Q9NW61 149 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 C9J4A7 227 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 H0YL77 283 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ST8SIA3O43173 380 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 UTS2O95399 124 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 TMEM225BP0DP42 221 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 LYL1P12980 280 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H1DP16402 221 aaKnown RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 DEFB128Q7Z7B8 93 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 IGKV1-8A0A0C4DH67 115 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 PNLIPP16233 465 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 EPHA1P21709 976 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 RND3P61587 244 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 Q8WTZ3 238 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 DGAT2Q96PD7 388 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 CCDC85CA6NKD9 419 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 BCAT2O15382 392 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 LATO43561 262 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 DEDDO75618 318 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 FXYD4P59646 89 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 OR5I1Q13606 314 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 RUNX2Q13950 521 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 GPR119Q8TDV5 335 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms