RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 OR9Q1Q8NGQ5 310 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 OR2AE1Q8NHA4 323 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 FAM81AQ8TBF8 368 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 LRRC29Q8WV35 223 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 ASB17Q8WXJ9 295 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 DYRK2Q92630 601 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 SGK3Q96BR1 496 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 NRBF2Q96F24 287 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 CCT8L2Q96SF2 557 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 MNTQ99583 582 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 BTBD10Q9BSF8 475 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 ABHD6Q9BV23 337 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 CHID1Q9BWS9 393 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 YIPF3Q9GZM5 350 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 FAM234AQ9H0X4 552 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 OR51V1Q9H2C8 321 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 ENOPH1Q9UHY7 261 aa6.46□□□□□ -1.38
CD44-211ENST00000442151 WNK2Q9Y3S1 2297 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 IGHV3-64DA0A0J9YX35 117 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 TCRBV5S2A0A599 114 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 H3BUI4 141 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 M0QZ24 198 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 HOXA3O43365 443 aaPredicted RBP6.45□□□□□ -1.38
CD44-211ENST00000442151 POU1F1P28069 291 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 DCTDP32321 178 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 ZNF121P58317 390 aaPredicted RBP6.45□□□□□ -1.38
CD44-211ENST00000442151 POU4F2Q12837 409 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 GINS1Q14691 196 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 CDONQ4KMG0 1287 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
CD44-211ENST00000442151 ZBTB37Q5TC79 503 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 NCR3LG1Q68D85 454 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 METAP1DQ6UB28 335 aaPredicted RBP6.45□□□□□ -1.38
CD44-211ENST00000442151 KCTD8Q6ZWB6 473 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 DACT3Q96B18 629 aaPredicted RBP6.45□□□□□ -1.38
CD44-211ENST00000442151 ZNF48Q96MX3 618 aaPredicted RBP6.45□□□□□ -1.38
CD44-211ENST00000442151 FEVQ99581 238 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 PAPOLGQ9BWT3 736 aaKnown RBP6.45□□□□□ -1.38
CD44-211ENST00000442151 ARMC1Q9NVT9 282 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 RASL12Q9NYN1 266 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 LAMP5Q9UJQ1 280 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 U3KQV3 271 aa6.45□□□□□ -1.38
CD44-211ENST00000442151 IGHV3OR16-10A0A075B7F0 116 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 CLPSL1A2RUU4 121 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 GYPBP06028 91 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 FBP1P09467 338 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 ATP6V1B2P21281 511 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 RAG2P55895 527 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 RPS7P62081 194 aaKnown RBP6.44□□□□□ -1.38
CD44-211ENST00000442151 ARF6P62330 175 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 GNG3P63215 75 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 KLHL12Q53G59 568 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 FAM201AQ5SY85 155 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 OLFML2AQ68BL7 652 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 ZDHHC23Q8IYP9 409 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 GCSAMQ8N6F7 178 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 OR8D4Q8NGM9 314 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 OR4Q3Q8NH05 313 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 OR5R1Q8NH85 324 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 OTOSQ8NHW6 89 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 ST8SIA4Q92187 359 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 PIGCQ92535 297 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 LHX4Q969G2 390 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 RNF170Q96K19 258 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 DUX5Q96PT3 197 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 THTPAQ9BU02 230 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 MROQ9BYG7 248 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 HAO2Q9NYQ3 351 aa6.44□□□□□ -1.38
CD44-211ENST00000442151 PDP1Q9P0J1 537 aaPredicted RBP6.44□□□□□ -1.38
CD44-211ENST00000442151 RPUSD1Q9UJJ7 312 aaKnown RBP6.44□□□□□ -1.38
CD44-211ENST00000442151 DOCK11Q5JSL3 2073 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 CENPVL3A0A0U1RRI6 287 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 ZNF816-ZNF321PA0A0X1KG74 233 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 hCG_38984A0A1B0GV85 526 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 OR5B21A6NL26 309 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 C22orf46C9J442 243 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 M0R1W7 72 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 GYG2O15488 501 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 SOX14O95416 240 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 PAHP00439 452 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 SLC2A1P11166 492 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 OPRL1P41146 370 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 TGM4P49221 684 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 RASSF2P50749 326 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 ACSM1Q08AH1 577 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 RIPPLY1Q0D2K3 151 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 ZNF829Q3KNS6 432 aaPredicted RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 LINC01590Q5TEZ4 76 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 C11orf88Q6PI97 169 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 FIP1L1Q6UN15 594 aaKnown RBP6.43□□□□□ -1.38
CD44-211ENST00000442151 LY6G5BQ8NDX9 201 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 CCDC54Q8NEL0 328 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 OR5A2Q8NGI9 324 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 OR5D13Q8NGL4 314 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 SIRPDQ9H106 197 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 TLNRD1Q9H1K6 362 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 RAB18Q9NP72 206 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 ONECUT1Q9UBC0 465 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 DNAJB9Q9UBS3 223 aa6.43□□□□□ -1.38
CD44-211ENST00000442151 SF3B6Q9Y3B4 125 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms