RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CIPCQ9C0C6 399 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 COA3Q9Y2R0 106 aaPredicted RBP9.21□□□□□ -0.93
SYNE2-206ENST00000441438 TTC3P53804 2025 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 TMPRSS2O15393 492 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 LGALS2P05162 132 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 ALPLP05186 524 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 MPC1LP0DKB6 136 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 SLC2A5P22732 501 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 FOXG1P55316 489 aaPredicted RBP9.21□□□□□ -0.94
SYNE2-206ENST00000441438 PITX1P78337 314 aaPredicted RBP9.21□□□□□ -0.94
SYNE2-206ENST00000441438 TPTE2P1Q5T6R2 138 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF787Q6DD87 383 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 ANKRD16Q6P6B7 361 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 NAPRTQ6XQN6 538 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 SKA2Q8WVK7 121 aaPredicted RBP9.21□□□□□ -0.94
SYNE2-206ENST00000441438 SMIM8Q96KF7 97 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 MAP1LC3AQ9H492 121 aa9.21□□□□□ -0.94
SYNE2-206ENST00000441438 A0A087WX48 190 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 LOC100289279A0A1B0GTE1 492 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 TRAPPC13A5PLN9 417 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 SYT7O43581 403 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 WDR1O75083 606 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 ALOX12BO75342 701 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 NDUFA7O95182 113 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 SFTPBP07988 381 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 LIMS3P0CW19 117 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 LIMS4P0CW20 117 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 AZU1P20160 251 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 GPD1P21695 349 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 LMO2P25791 158 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 KIR2DL3P43628 341 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 CTSCP53634 463 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 RAB25P57735 213 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PRR20EP86478 221 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PRR20CP86479 221 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PRR20DP86480 221 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PRR20BP86481 221 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PRR20AP86496 221 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 CFHR1Q03591 330 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 MFGE8Q08431 387 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF385BQ569K4 471 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 AWAT2Q6E213 333 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 FAAP20Q6NZ36 180 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 C8orf82Q6P1X6 216 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 WDR82Q6UXN9 313 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PLXDC1Q8IUK5 500 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 JAGN1Q8N5M9 183 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 RAB2BQ8WUD1 216 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 APOBEC3DQ96AK3 386 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 GUCD1Q96NT3 240 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 FOXB1Q99853 325 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 METTL17Q9H7H0 456 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 NANOGQ9H9S0 305 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 ERI3O43414 337 aaKnown RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 SLC16A7O60669 478 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 GATA3P23771 443 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PCBP4P57723 403 aaKnown RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PSG6Q00889 435 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 FAM90A2PQ658T7 463 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 RBM23Q86U06 439 aaKnown RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 OR4F6Q8NGB9 312 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 ARRDC2Q8TBH0 407 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 KIRREL1Q96J84 757 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 SNRNP25Q9BV90 132 aaKnown RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 FUNDC2Q9BWH2 189 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 GPR35Q9HC97 309 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 ELOVL5Q9NYP7 299 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 PRR13Q9NZ81 148 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 TRIP12Q14669 1992 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 TMEM218A2RU14 115 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 LMO7DNF2Z398 122 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 LDB3O75112 727 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 HIST1H2ABP04908 130 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 HIST1H2ADP20671 130 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 CERS1P27544 350 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 S100A2P29034 98 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 MAGEA5P43359 124 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 CSRP3P50461 194 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 EIF4HQ15056 248 aaKnown RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF776Q68DI1 518 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 RPTNQ6XPR3 784 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 HIST3H2AQ7L7L0 130 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 C5orf24Q7Z6I8 188 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 MRGPRGQ86SM5 289 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 OR5AN1Q8NGI8 311 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 RPLP0P6Q8NHW5 317 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 SMAP2Q8WU79 429 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-206ENST00000441438 WDR92Q96MX6 357 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 IKZF5Q9H5V7 419 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 AKIP1Q9NQ31 210 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 LHX3Q9UBR4 397 aa9.2□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF638Q14966 1978 aaKnown RBP9.19□□□□□ -0.94
SYNE2-206ENST00000441438 IGKV6-21A0A0C4DH24 114 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 A0A1W2PRE2 83 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 SOCS2O14508 198 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 ICOSLGO75144 302 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 CLRN1P58418 232 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 RPL8P62917 257 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms