RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ZNF222Q9UK12 451 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 MCTS1Q9ULC4 181 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 PLEKHA6Q9Y2H5 1048 aa8.01□□□□□ -1.13
HDAC6-209ENST00000440653 MRPS28Q9Y2Q9 187 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 MRPS18BQ9Y676 258 aaKnown RBP8.01□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF469Q96JG9 3925 aaPredicted RBP8□□□□□ -1.13
HDAC6-209ENST00000440653 IGHV3-15A0A0B4J1V0 119 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 LOC101059948A0A1B0GTJ6 334 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR6C6A6NF89 314 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF736B4DX44 427 aaPredicted RBP8□□□□□ -1.13
HDAC6-209ENST00000440653 DISC1C4P0D8 188 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 CXCL13O43927 109 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 NME2P1O60361 137 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 TRAPPC6AO75865 159 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 NEURL1O76050 574 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 RGS11O94810 467 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 SYNGR4O95473 234 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 RAB3DO95716 219 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF24P17028 368 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 KLK2P20151 261 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 NME2P22392 152 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 CRYGSP22914 178 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 S100A1P23297 94 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 RAP2BP61225 183 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 QRFPP83859 136 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 MFAP5Q13361 173 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR1C1Q15619 314 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 MPPED2Q15777 294 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 PNLIPRP3Q17RR3 467 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 WIPI1Q5MNZ9 446 aaPredicted RBP8□□□□□ -1.13
HDAC6-209ENST00000440653 ZBTB37Q5TC79 503 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 SP5Q6BEB4 398 aaPredicted RBP8□□□□□ -1.13
HDAC6-209ENST00000440653 LPCAT3Q6P1A2 487 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 SEZ6L2Q6UXD5 910 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 SPNS3Q6ZMD2 512 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 Q6ZTK2 550 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 DPPA2Q7Z7J5 298 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF100Q8IYN0 542 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR5AS1Q8N127 324 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 STEAP2Q8NFT2 490 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR11H7Q8NGC8 314 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR52N4Q8NGI2 321 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR56B1Q8NGI3 324 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR14K1Q8NGZ2 314 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 PPP1R14AQ96A00 147 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 SEH1LQ96EE3 360 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 FAM71F1Q96KD3 344 aaPredicted RBP8□□□□□ -1.13
HDAC6-209ENST00000440653 FOXB1Q99853 325 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM246Q9BRR3 403 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 RBM24Q9BX46 236 aaKnown RBP8□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM59Q9BXS4 323 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 ALX4Q9H161 411 aaPredicted RBP8□□□□□ -1.13
HDAC6-209ENST00000440653 IFT46Q9NQC8 304 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8□□□□□ -1.13
HDAC6-209ENST00000440653 DEPPQ9NTK1 212 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 PARPBPQ9NWS1 579 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 NBEAL1Q6ZS30 2694 aa8□□□□□ -1.13
HDAC6-209ENST00000440653 OR5H15A6NDH6 313 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF724A8MTY0 619 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 KLRC4-KLRK1H3BQV0 150 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 RAB27BO00194 218 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 XRCC2O43543 280 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 SYNGR3O43761 229 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 CA11O75493 328 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ACTL6AO96019 429 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 VSIG8P0DPA2 414 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 FCGR2AP12318 317 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 CD46P15529 392 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF708P17019 499 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 SOX8P57073 446 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 IFITM2Q01629 132 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 PLA2G7Q13093 441 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 UNC119Q13432 240 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 GK2Q14410 553 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 PPA1Q15181 289 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 RNPS1Q15287 305 aaKnown RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 KRTAP27-1Q3LI81 207 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF260Q3ZCT1 412 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 RNASE10Q5GAN6 216 aaKnown RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM255AQ5JRV8 349 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 PHYHD1Q5SRE7 291 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 SFRP4Q6FHJ7 346 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 TMEM53Q6P2H8 277 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 MTFR2Q6P444 385 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ALPK2Q86TB3 2170 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF101Q8IZC7 436 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 PIAS4Q8N2W9 510 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 C9orf62Q8N4C0 152 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 IL22RA1Q8N6P7 574 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ZDHHC22Q8N966 263 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 OR10R2Q8NGX6 335 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 OR1F12Q8NHA8 337 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 NKD1Q969G9 470 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ALKBH3Q96Q83 286 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 GPER1Q99527 375 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 TTTY12Q9BZ98 90 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 ZNF436Q9C0F3 470 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-209ENST00000440653 OR10A4Q9H209 315 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 KCNK15Q9H427 330 aa7.99□□□□□ -1.13
HDAC6-209ENST00000440653 OPA3Q9H6K4 179 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms