RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PSG4Q00888 419 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 GABRA6Q16445 453 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 HIKESHIQ53FT3 197 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 RNASE12Q5GAN4 147 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 SEZ6L2Q6UXD5 910 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 PRSS45Q7RTY3 260 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 DPPA2Q7Z7J5 298 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 OR51D1Q8NGF3 324 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 FAM3DQ96BQ1 224 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-204ENST00000440083 A0A096LPE4 126 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 A0A1W2PPZ6 126 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 OR5H1A6NKK0 313 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 DEFB108AA8MXU0 73 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 CTDSPLO15194 276 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 IGLV3-1P01715 115 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 HCKP08631 526 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 MMP7P09237 267 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 CD79AP11912 226 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ARSBP15848 533 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 SPNP16150 400 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ARR3P36575 388 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 MMP15P51511 669 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 BCAP31P51572 246 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 MRPS10P82664 201 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 C1orf100Q5SVJ3 147 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 CCBE1Q6UXH8 406 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 GDPD3Q7L5L3 318 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TMEM200AQ86VY9 491 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 WDR31Q8NA23 367 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 OR14K1Q8NGZ2 314 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 C10orf35Q96D05 121 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 C14orf79Q96F83 325 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 UQCC2Q9BRT2 126 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 THAP7Q9BT49 309 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TEX15Q9BXT5 2789 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 OR10A4Q9H209 315 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 METTL17Q9H7H0 456 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 NEK6Q9HC98 313 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 DIABLOQ9NR28 239 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ZNF319Q9P2F9 582 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ZNF391Q9UJN7 358 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 V9GYS6 101 aa12.58□□□□□ -0.4
TNFRSF1A-204ENST00000440083 CADP27708 2225 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 A0A1W2PPR1 153 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 LOC390937A0A1W2PQ73 354 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 GSTZ1O43708 216 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 CTAG2O75638 210 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TPPPO94811 219 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 PPP3CBP16298 524 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 LOXP28300 417 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 SSTR2P30874 369 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 PLP2Q04941 152 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 DAZAP2Q15038 168 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 KRTAP27-1Q3LI81 207 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 FAM166AQ6J272 317 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ANKRD16Q6P6B7 361 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ZNF627Q7L945 461 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 NAA40Q86UY6 237 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 OR1K1Q8NGR3 316 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 PP6455Q8WZ26 134 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 PIK3IP1Q96FE7 263 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 REEP6Q96HR9 211 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 LYZL4Q96KX0 146 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ABHD1Q96SE0 405 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 C11orf54Q9H0W9 315 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 RGCCQ9H4X1 137 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 NPAP1Q9NZP6 1156 aa12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TMEM272A0A1B0GTI8 110 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 CENPXA8MT69 81 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 LYRM1O43325 122 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 XRCC2O43543 280 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 COX5BP10606 129 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 CDK2P24941 298 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 ZNF93P35789 620 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 MNDAP41218 407 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TAS2R20P59543 309 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 SNAI3Q3KNW1 292 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 C2orf76Q3KRA6 126 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TBRG1Q3YBR2 411 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 NRARPQ7Z6K4 114 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TOMM5Q8N4H5 51 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 PNLDC1Q8NA58 520 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 SEMA6DQ8NFY4 1073 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 OR52N4Q8NGI2 321 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 FGFBP3Q8TAT2 258 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 SMIM4Q8WVI0 70 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 AKAP1Q92667 903 aaKnown RBP eCLIP12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 NRGNQ92686 78 aa12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 BCL2L2Q92843 193 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-204ENST00000440083 TRIM63Q969Q1 353 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms