RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 GLS2Q9UI32 602 aa11.91□□□□□ -0.5
HERPUD1-204ENST00000439977 MFNGO00587 321 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 ANGPTL7O43827 346 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 MSX1P28360 303 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 PPP1R3BQ86XI6 285 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 OR56B1Q8NGI3 324 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 DNASE2BQ8WZ79 361 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 URM1Q9BTM9 101 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 HRH4Q9H3N8 390 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 PIGLQ9Y2B2 252 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 FLVCR1Q9Y5Y0 555 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 CHCHD2Q9Y6H1 151 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 CACNA1EQ15878 2313 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 HPNP05981 417 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 GSTP1P09211 210 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 ADCYAP1P18509 176 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 MPZP25189 248 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 CDCP2Q5VXM1 449 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 CRIP3Q6Q6R5 217 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 DOK3Q7L591 496 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 BAP18Q8IXM2 172 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 TDHQ8IZJ6 230 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 SLC22A8Q8TCC7 542 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 MRPS17Q9Y2R5 130 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 FAM96BQ9Y3D0 163 aa11.9□□□□□ -0.5
HERPUD1-204ENST00000439977 AGPAT2O15120 278 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNHIT1O43257 154 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 SFT2D2O95562 160 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 CCL3P10147 92 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 CSNK1A1P48729 337 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 RRADP55042 308 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 CLEC9AQ6UXN8 241 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 CBLN2Q8IUK8 224 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 C20orf196Q8IYI0 205 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 PUSL1Q8N0Z8 303 aaKnown RBP11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 BATF2Q8N1L9 274 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 S100A13Q99584 98 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 CDC6Q99741 560 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 CYTL1Q9NRR1 136 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 PLEK2Q9NYT0 353 aa11.9□□□□□ -0.51
HERPUD1-204ENST00000439977 AQP7P3A6NL99 342 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 SCGNO76038 276 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 RSPO1Q2MKA7 263 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 SNAI3Q3KNW1 292 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 PARP12Q9H0J9 701 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 MOB1AQ9H8S9 216 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 FANCFQ9NPI8 374 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 GPR173Q9NS66 373 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 EML6Q6ZMW3 1958 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 FAM221AA4D161 298 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNF705EA8MWA4 302 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 ETV2O00321 342 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 TBPP20226 339 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 RIPPLY1Q0D2K3 151 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 PDCD1Q15116 288 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 CHRFAM7AQ494W8 412 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 SLC25A53Q5H9E4 307 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 SLC6A15Q9H2J7 730 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 PIGMQ9H3S5 423 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 TREM1Q9NP99 234 aa11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 MCTS1Q9ULC4 181 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-204ENST00000439977 TEX13DA0A0J9YY54 714 aaPredicted RBP11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 TMEM218A2RU14 115 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 PCP4L1A6NKN8 68 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 SPRY1O43609 319 aaPredicted RBP11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 ATG12O94817 140 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 OPRM1P35372 400 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 TAS2R31P59538 309 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 VAX1Q5SQQ9 334 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNF385CQ66K41 422 aaPredicted RBP11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 ARRDC1Q8N5I2 433 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 DYRK2Q92630 601 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 PECRQ9BY49 303 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 NMES1Q9C002 83 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 PI4KAP42356 2102 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 LY6G6EA0A0G2JKS1 128 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 DHRS7CA6NNS2 312 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 F8W036 122 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 TLX3O43711 291 aaPredicted RBP11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 TMEM225BP0DP42 221 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 ID4P47928 161 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 GSK3AP49840 483 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 BLOC1S1P78537 153 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 OCSTAMPQ9BR26 566 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 TLNRD1Q9H1K6 362 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms