RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 WDR86Q86TI4 376 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 GCSAMQ8N6F7 178 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 OR5P3Q8WZ94 311 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 FAM71F1Q96KD3 344 aaPredicted RBP20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 MRI1Q9BV20 369 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 TLNRD1Q9H1K6 362 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 MRM2Q9UI43 246 aaKnown RBP20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 OR52A1Q9UKL2 312 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 INSIG2Q9Y5U4 225 aa20.66■□□□□ 0.9
RAPGEF1-206ENST00000438647 A0A1W2PQL4 384 aaPredicted RBP20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 SRSF10O75494 262 aaKnown RBP20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 LHBP01229 141 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 PSMB10P40306 273 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 BTNL3Q6UXE8 466 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 KCTD8Q6ZWB6 473 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 YIPF7Q8N8F6 280 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 LRRC29Q8WV35 223 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 OCEL1Q9H607 264 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 PPP1R3EQ9H7J1 279 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 OPN4Q9UHM6 478 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 GMPPBQ9Y5P6 360 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 AUP1Q9Y679 476 aa20.65■□□□□ 0.9
RAPGEF1-206ENST00000438647 E9PQ18 207 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 MAGEB4O15481 346 aaPredicted RBP20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 SULT1C4O75897 302 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 DHRS3O75911 302 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 APOL3O95236 402 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 BAG2O95816 211 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 TTRP02766 147 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 CFHR2P36980 270 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 MTNR1AP48039 350 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 CSNK2BP67870 215 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 TEX36Q5VZQ5 186 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 WDR82Q6UXN9 313 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 SSX6Q7RTT6 188 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 C11orf53Q8IXP5 236 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 ELMOD2Q8IZ81 293 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 RNF170Q96K19 258 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 ERVK-18Q9QC07 812 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 ENPP5Q9UJA9 477 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 DNHD1Q96M86 4753 aa20.64■□□□□ 0.89
RAPGEF1-206ENST00000438647 A0A0A6YYJ9 748 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 METTL15A6NJ78 407 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 CDIPTO14735 213 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 ENTPD6O75354 484 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 MUC1P15941 1255 aaPredicted RBP20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 ADRA2CP18825 462 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 EPHA1P21709 976 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 OCLNQ16625 522 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 ZSCAN26Q16670 478 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 MICBQ29980 383 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 FAM76BQ5HYJ3 339 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 WDR25Q64LD2 544 aaPredicted RBP20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 LYPD2Q6UXB3 125 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 PLEKHG7Q6ZR37 379 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 FAM220AQ7Z4H9 259 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 HPSE2Q8WWQ2 592 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 UBE2FQ969M7 185 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 MBOAT4Q96T53 435 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 PIGLQ9Y2B2 252 aa20.63■□□□□ 0.89
RAPGEF1-206ENST00000438647 IGHV2-70DA0A0C4DH43 119 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 ADAM20O43506 726 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 MPZL2O60487 215 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 RPP14O95059 124 aaKnown RBP20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 GNG3P63215 75 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 ACTC1P68032 377 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 ACTA1P68133 377 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 HOXA4Q00056 320 aaPredicted RBP20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 CEACAM21Q3KPI0 293 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 ARMCX4Q5H9R4 360 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 OR10Z1Q8NGY1 313 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 ZNF418Q8TF45 676 aaPredicted RBP20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 RAB40AQ8WXH6 277 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 PPP1R14AQ96A00 147 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 TECTBQ96PL2 329 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 SLC29A1Q99808 456 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 DOCK11Q5JSL3 2073 aa20.62■□□□□ 0.89
RAPGEF1-206ENST00000438647 OR5B21A6NL26 309 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 DHRS7CA6NNS2 312 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 EGR1P18146 543 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 PAX2Q02962 417 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 CD276Q5ZPR3 534 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 ZNF841Q6ZN19 808 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 FAM90A1Q86YD7 464 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 OR5A2Q8NGI9 324 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 SPATA3Q8NHX4 192 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 C12orf43Q96C57 262 aaKnown RBP20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 RNFT2Q96EX2 444 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 PCDHGB1Q9Y5G3 927 aa20.61■□□□□ 0.89
RAPGEF1-206ENST00000438647 SRRM5B3KS81 715 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 GYPAP02724 150 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 FAHP16930 419 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 GPM6AP51674 278 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 PAX8Q06710 450 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 CEP78Q5JTW2 689 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 ZNF684Q5T5D7 378 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 PLCXD3Q63HM9 321 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 DOK3Q7L591 496 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 SCCPDHQ8NBX0 429 aa20.6■□□□□ 0.89
RAPGEF1-206ENST00000438647 RPL3LQ92901 407 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms