RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 C2orf50Q96LR7 162 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 SIGLEC7Q9Y286 467 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 CALHM3Q86XJ0 350 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 WDR89Q96FK6 387 aaPredicted RBP15.4■□□□□ 0.06
PTPRF-209ENST00000438120 HSPB2A8KAH6 182 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 SEC14L6B5MCN3 397 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 HSPB2Q16082 182 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 C4orf17Q53FE4 359 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 PLA1AQ53H76 456 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 ZNF774Q6NX45 483 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 TAAR6Q96RI8 345 aa15.4■□□□□ 0.06
PTPRF-209ENST00000438120 SHROOM3Q8TF72 1996 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 CLEC18AA5D8T8 446 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 SLC25A4P12235 298 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 FGF7P21781 194 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 AVPR2P30518 371 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 WNT3P56703 355 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 PRICKLE4Q2TBC4 344 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 WDR38Q5JTN6 314 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 LIMS2Q7Z4I7 341 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 DND1Q8IYX4 353 aaKnown RBP15.39■□□□□ 0.05
PTPRF-209ENST00000438120 CLEC18CQ8NCF0 446 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 EID2BQ96D98 161 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 IGHV1OR15-9A0A0B4J2B8 117 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 CST7O76096 145 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 RFESDQ8TAC1 157 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 DNAJB12Q9NXW2 375 aaKnown RBP15.39■□□□□ 0.05
PTPRF-209ENST00000438120 RRASP10301 218 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 IL9P15248 144 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 THBS4P35443 961 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 ACER2Q5QJU3 275 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 OR5AP2Q8NGF4 316 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 TNRC6CQ9HCJ0 1690 aaKnown RBP15.39■□□□□ 0.05
PTPRF-209ENST00000438120 NKX2-2O95096 273 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 KRASP01116 189 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 ZBTB25P24278 435 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 MPPED2Q15777 294 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 BTNL8Q6UX41 500 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 BHLHA9Q7RTU4 235 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 CORO2AQ92828 525 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 ZNF707Q96C28 371 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-209ENST00000438120 MYH14Q7Z406 1995 aaKnown RBP15.39■□□□□ 0.05
PTPRF-209ENST00000438120 LYZL6O75951 148 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 ADGRL4Q9HBW9 690 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 CROCCQ5TZA2 2017 aa15.39■□□□□ 0.05
PTPRF-209ENST00000438120 TRAV17A0A0B4J275 112 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 UBE2L5PA0A1B0GUS4 154 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 NDUFB3O43676 98 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 ONECUT2O95948 504 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 Q7L0L9 218 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 FER1L6Q2WGJ9 1857 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 CRYABP02511 175 aaKnown RBP15.38■□□□□ 0.05
PTPRF-209ENST00000438120 OR2B8PP59922 312 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 GPR32P1Q8NGA4 272 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 SLC35D1Q9NTN3 355 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 SCN9AQ15858 1988 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 ATP6V1G2-DDX39BF2Z307 99 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 PYCARD-AS1I3L0S3 204 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 M0R1X1 148 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 COX7A2P2O60397 106 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 C17orf78Q8N4C9 275 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 OR2A5Q96R48 311 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 OR5I1Q13606 314 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 C12orf73Q69YU5 71 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 WNT16Q9UBV4 365 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 TMEFF2Q9UIK5 374 aaPredicted RBP15.38■□□□□ 0.05
PTPRF-209ENST00000438120 BRWD1Q9NSI6 2320 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 IGHV3-13P01766 116 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 IGHV3-7P01780 117 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 CT62P0C5K7 136 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 LIMK1P53667 647 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 TIGITQ495A1 244 aa15.38■□□□□ 0.05
PTPRF-209ENST00000438120 LAMB1P07942 1786 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 FCER1GP30273 86 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 BPIFB3P59826 476 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 LRRC10Q5BKY1 277 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 PWWP2BQ6NUJ5 590 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 C1orf210Q8IVY1 113 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 EDARADDQ8WWZ3 215 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 MOB3AQ96BX8 217 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 TSPAN32Q96QS1 320 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 MPZL1O95297 269 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 DHODHQ02127 395 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 PELI1Q96FA3 418 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 SRRQ9GZT4 340 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 FAM60AQ9NP50 221 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 IL20Q9NYY1 176 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 ECM29Q5VYK3 1845 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 A0A1B0GUH1 482 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 SLC17A2O00624 439 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 METTL15P1P0C7V9 234 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 PRR35P0CG20 571 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 COX5AP20674 150 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 MSRB3Q8IXL7 192 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 RYDENQ9NUL5 291 aaKnown RBP15.37■□□□□ 0.05
PTPRF-209ENST00000438120 IGLV3-16A0A075B6K0 115 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 MBTPS2O43462 519 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 DRD3P35462 400 aa15.37■□□□□ 0.05
PTPRF-209ENST00000438120 IL11RAQ14626 422 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms