RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 TXNL4BQ9NX01 149 aaKnown RBP5.4□□□□□ -1.55
SPEN-202ENST00000438066 YARS2Q9Y2Z4 477 aaKnown RBP5.4□□□□□ -1.55
SPEN-202ENST00000438066 SLC6A5Q9Y345 797 aa5.4□□□□□ -1.55
SPEN-202ENST00000438066 PCSK5Q92824 1860 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 DOCK10Q96BY6 2186 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 IGHV1-45A0A0A0MS14 117 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 TMED7-TICAM2A0A0A6YYA0 188 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 C9J4A7 227 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 CDX4O14627 284 aaPredicted RBP5.39□□□□□ -1.55
SPEN-202ENST00000438066 IMPA2O14732 288 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 LRRTM2O43300 516 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 OR2J2O76002 312 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 NUDT14O95848 222 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 KLK3P07288 261 aaPredicted RBP5.39□□□□□ -1.55
SPEN-202ENST00000438066 COX6A1P12074 109 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 SPI1P17947 270 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 CXCR1P25024 350 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 PTGDSP41222 190 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 RPS5P46782 204 aaKnown RBP5.39□□□□□ -1.55
SPEN-202ENST00000438066 SLC25A1P53007 311 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 ERVK-25P63136 954 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 ACTC1P68032 377 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 ACTA1P68133 377 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 FABP5Q01469 135 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 ZNF85Q03923 595 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 GPR50Q13585 617 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 ZNF846Q147U1 533 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 EXT1Q16394 746 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 LRRC37A5PQ49AS3 106 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 LINC01590Q5TEZ4 76 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 C5orf46Q6UWT4 87 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 TMPRSS11AQ6ZMR5 421 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 NANOGNBQ7Z5D8 188 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 RFLNBQ8N5W9 214 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 ZFP41Q8N8Y5 198 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 OR10H4Q8NGA5 316 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 OR6M1Q8NGM8 313 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 OR13C5Q8NGS8 318 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 FNDC8Q8TC99 324 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 CHPT1Q8WUD6 406 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 SPRYD4Q8WW59 207 aaPredicted RBP5.39□□□□□ -1.55
SPEN-202ENST00000438066 ZNRF4Q8WWF5 429 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 IMMP1LQ96LU5 166 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 Q96M85 177 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 NMNAT3Q96T66 252 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 MED18Q9BUE0 208 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 BARHL1Q9BZE3 327 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 ISG20L2Q9H9L3 353 aaKnown RBP5.39□□□□□ -1.55
SPEN-202ENST00000438066 EXOSC4Q9NPD3 245 aaKnown RBP5.39□□□□□ -1.55
SPEN-202ENST00000438066 SLC39A1Q9NY26 324 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 SSR3Q9UNL2 185 aa5.39□□□□□ -1.55
SPEN-202ENST00000438066 PCNX2A6NKB5 2137 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 KNTC1P50748 2209 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 KIAA1549Q9HCM3 1950 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 A0A075B6Q4 140 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 PNMA8CA0A1B0GUJ8 204 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 IQCMA0A1B0GVH7 501 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 TRDV1A0A1B0GX56 115 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 A0A1W2PQL4 384 aaPredicted RBP5.38□□□□□ -1.55
SPEN-202ENST00000438066 DAPL1A0PJW8 107 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 TMEM72A0PK05 275 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 A8MVM7 634 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 SNURFLB1AK76 121 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 FTCDNL1E5RQL4 147 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 BLOC1S5-TXNDC5H3BN57 136 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 CHEK1O14757 476 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 MRPL3P09001 348 aaKnown RBP5.38□□□□□ -1.55
SPEN-202ENST00000438066 RPA2P15927 270 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 CELP19835 753 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 GALP22466 123 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 ETV6P41212 452 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 CDKN2AP42771 156 aaKnown RBP5.38□□□□□ -1.55
SPEN-202ENST00000438066 TAF13Q15543 124 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 MESTQ5EB52 335 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 LCN1P1Q5VSP4 162 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 C1orf140Q5VVS0 124 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 NCR3LG1Q68D85 454 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 C22orf42Q6IC83 251 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 SSX6Q7RTT6 188 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 NAXDQ8IW45 347 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 SYT14Q8NB59 555 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 ATP6V1C2Q8NEY4 427 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 OR11G2Q8NGC1 345 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 OR10G3Q8NGC4 313 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 OR6S1Q8NH40 331 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 SLC22A8Q8TCC7 542 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 TMEM234Q8WY98 164 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 RPL36ALQ969Q0 106 aaKnown RBP5.38□□□□□ -1.55
SPEN-202ENST00000438066 TMEM203Q969S6 136 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 SLC25A46Q96AG3 418 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 NTNG2Q96CW9 530 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 ZMYND19Q96E35 227 aaPredicted RBP5.38□□□□□ -1.55
SPEN-202ENST00000438066 TSPAN32Q96QS1 320 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 CNN2Q99439 309 aaKnown RBP5.38□□□□□ -1.55
SPEN-202ENST00000438066 TBX5Q99593 518 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 DEFB126Q9BYW3 111 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 BABAM2Q9NXR7 383 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 ELOVL5Q9NYP7 299 aa5.38□□□□□ -1.55
SPEN-202ENST00000438066 RDH8Q9NYR8 311 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms