RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RAB31Q13636 194 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 YIF1BQ5BJH7 314 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 NIPAL1Q6NVV3 410 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 DNM1P34Q6PK57 102 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 MRPL52Q86TS9 123 aaKnown RBP3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 TRAPPC5Q8IUR0 188 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 VKORC1L1Q8N0U8 176 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 LRRC52Q8N7C0 313 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 PRELID2Q8N945 189 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUSP18Q8NEJ0 188 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 BLOC1S5Q8TDH9 187 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 FAM172AQ8WUF8 416 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 TMEM54Q969K7 222 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 EXOSC8Q96B26 276 aaKnown RBP3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 YIPF6Q96EC8 236 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 PRRT1Q99946 306 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 BCL2L14Q9BZR8 327 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 C6orf62Q9GZU0 229 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 DSN1Q9H410 356 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 UBE2ZQ9H832 354 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 IFT46Q9NQC8 304 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 CTPS2Q9NRF8 586 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 CCL28Q9NRJ3 127 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 SLC2A9Q9NRM0 540 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 PLSCR3Q9NRY6 295 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 ZNF226Q9NYT6 803 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 SLC25A37Q9NYZ2 338 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 MMACHCQ9Y4U1 282 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 HEBP2Q9Y5Z4 205 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 CACNG2Q9Y698 323 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 USH1CQ9Y6N9 552 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 ATRXP46100 2492 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 MROH7Q68CQ1 1323 aa3.17□□□□□ -1.9
HMGB1P45-201ENST00000435986 CNTNAP1P78357 1384 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 A0A1B0GVI7 797 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 A0A1B0GW55 424 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 GNG14A0A1W2PPG7 69 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 SLC5A10A0PJK1 596 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 FUOMA2VDF0 154 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 C9J4A7 227 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 LAD1O00515 517 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 TNFSF13O75888 250 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 MPZL1O95297 269 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 ATP6V1G2O95670 118 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 SERPINA1P01009 418 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 HLA-AP01891 365 aaKnown RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 TCRBP04435 133 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 CALB1P05937 261 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 CDK1P06493 297 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 ZDHHC11BP0C7U3 371 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4L2P0CJ85 424 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4L3P0CJ86 424 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4L4P0CJ87 422 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4L5P0CJ88 424 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4L6P0CJ89 424 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4L7P0CJ90 424 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 GFAPP14136 432 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 M6PRP20645 277 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 ME2P23368 584 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 NOVP48745 357 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 AP2S1P53680 142 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 RHOAP61586 193 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 STXBP1P61764 594 aaKnown RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 RPL31P62899 125 aaKnown RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 NDPQ00604 133 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 HMGCS1Q01581 520 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 MLLT11Q13015 90 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 SPA17Q15506 151 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 MPPED2Q15777 294 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 ACSM3Q53FZ2 586 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 CPTPQ5TA50 214 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 FAM45BPQ6NSW5 357 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4L9Q6RFH8 374 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 RFLNAQ6ZTI6 216 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 THOC6Q86W42 341 aaKnown RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 STPG2Q8N412 459 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 RIBC1Q8N443 379 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 WDR31Q8NA23 367 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 PIGXQ8TBF5 258 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 FAM45AQ8TCE6 357 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 SFXN5Q8TD22 340 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 NEK7Q8TDX7 302 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 APH1BQ8WW43 257 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 NELFBQ8WX92 580 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 AURKBQ96GD4 344 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 PRAP1Q96NZ9 151 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 OR2M2Q96R28 347 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 PLEKHF1Q96S99 279 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 LINC00597Q9H2U6 94 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 MFSD1Q9H3U5 465 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 TMEM38AQ9H6F2 299 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 CWH43Q9H720 699 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 C12orf10Q9HB07 376 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 FAM49BQ9NUQ9 324 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 GID8Q9NWU2 228 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 RPS6KB2Q9UBS0 482 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 DUX4Q9UBX2 424 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 SNX24Q9Y343 169 aa3.16□□□□□ -1.9
HMGB1P45-201ENST00000435986 MRPS18BQ9Y676 258 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms