RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 RBM24Q9BX46 236 aaKnown RBP16.31■□□□□ 0.2
CLK1-205ENST00000434813 SRXN1Q9BYN0 137 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 KCNMB2Q9Y691 235 aa16.31■□□□□ 0.2
CLK1-205ENST00000434813 NCOA6Q14686 2063 aaPredicted RBP16.31■□□□□ 0.2
CLK1-205ENST00000434813 DBX1A6NMT0 343 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 POM121CA8CG34 1229 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 B8ZZF3 427 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 M0R135 149 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 RLN2P04090 185 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 VAMP1P23763 118 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
CLK1-205ENST00000434813 MRPS34P82930 218 aaKnown RBP16.3■□□□□ 0.2
CLK1-205ENST00000434813 MARCH1Q8TCQ1 289 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 ST8SIA2Q92186 375 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 ZNF799Q96GE5 643 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 SESN1Q9Y6P5 492 aa16.3■□□□□ 0.2
CLK1-205ENST00000434813 AKR1C4P17516 323 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 SRD5A2P31213 254 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 B3GALT5-AS1P59052 145 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 CCDC157Q569K6 752 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 JMJD6Q6NYC1 403 aaPredicted RBP16.29■□□□□ 0.2
CLK1-205ENST00000434813 SLC16A14Q7RTX9 510 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 DTX1Q86Y01 620 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 OR1S1Q8NH92 325 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 WDFY3Q8IZQ1 3526 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 RNF222A6NCQ9 220 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 B4E171 279 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 BCL2L11O43521 198 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 FAHP16930 419 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 TSPAN7P41732 249 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 ATP1B3P54709 279 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 RAC3P60763 192 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 UBE2V2Q15819 145 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 FAM27BQ5VT28 67 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 PDZD9Q8IXQ8 264 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 OR5D18Q8NGL1 313 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 CASTOR1Q8WTX7 329 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 SPTSSAQ969W0 71 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 CCDC120Q96HB5 630 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 SEC22AQ96IW7 307 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 PLEK2Q9NYT0 353 aa16.29■□□□□ 0.2
CLK1-205ENST00000434813 MASP2O00187 686 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 MTRF1O75570 445 aaKnown RBP16.28■□□□□ 0.2
CLK1-205ENST00000434813 CHAF1BQ13112 559 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 LRRC37A5PQ49AS3 106 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 C1QL2Q7Z5L3 287 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 PPP1R32Q7Z5V6 425 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 OR51T1Q8NGJ9 327 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 NPRL2Q8WTW4 380 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 KCNE4Q8WWG9 221 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 HAS2Q92819 552 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 FBXO17Q96EF6 278 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 PRRX2Q99811 253 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 TM2D1Q9BX74 207 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 C1QTNF6Q9BXI9 259 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 GPR132Q9UNW8 380 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 PIGLQ9Y2B2 252 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 KANTRA0A1W2PQU2 76 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 STMND1H3BQB6 276 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 SCO1O75880 301 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 FPR2P25090 351 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 DLSTP36957 453 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 BAMBIQ13145 260 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 ARFRP1Q13795 201 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 TMEM128Q5BJH2 165 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 ACOT7LQ6ZUV0 252 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 PEG10Q86TG7 708 aaKnown RBP16.28■□□□□ 0.2
CLK1-205ENST00000434813 GPR137CQ8N3F9 429 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 OR5H2Q8NGV7 314 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 VRK1Q99986 396 aaPredicted RBP16.28■□□□□ 0.2
CLK1-205ENST00000434813 SLC25A32Q9H2D1 315 aa16.28■□□□□ 0.2
CLK1-205ENST00000434813 COL27A1Q8IZC6 1860 aaPredicted RBP16.27■□□□□ 0.2
CLK1-205ENST00000434813 A0A0G2JMM0 328 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 A0A1W2PPB8 328 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 A0A1W2PRS3 328 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 KIR3DP1A8MWS1 328 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 A8MXK9 166 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 P04436 131 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 DBHP09172 617 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 AMY2BP19961 511 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 CRYGSP22914 178 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 RAB35Q15286 201 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 OVCH2Q7RTZ1 564 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 HSD17B13Q7Z5P4 300 aaPredicted RBP16.27■□□□□ 0.2
CLK1-205ENST00000434813 GGNQ86UU5 652 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 LHFPL1Q86WI0 220 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 TMEM185AQ8NFB2 350 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 OR52H1Q8NGJ2 320 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 TMEM230Q96A57 120 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 ZNF837Q96EG3 531 aaPredicted RBP16.27■□□□□ 0.2
CLK1-205ENST00000434813 CYYR1Q96J86 154 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 DMRTA2Q96SC8 542 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 STRADBQ9C0K7 418 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 C5orf66Q9H5L9 145 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 PCDHGA1Q9Y5H4 931 aa16.27■□□□□ 0.2
CLK1-205ENST00000434813 CFAP54Q96N23 3096 aa16.27■□□□□ 0.19
CLK1-205ENST00000434813 DHRS7CA6NNS2 312 aa16.26■□□□□ 0.19
CLK1-205ENST00000434813 FAM25EA8MYX2 175 aa16.26■□□□□ 0.19
CLK1-205ENST00000434813 HPNP05981 417 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms