RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 VGLL3A8MV65 326 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 M0R135 149 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 DCTN6O00399 190 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 GMDSO60547 372 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 PTP4A3O75365 173 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 GYPAP02724 150 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 GRPP07492 148 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 EEF1B2P24534 225 aaKnown RBP11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 SLC6A6P31641 620 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 IFNGR2P38484 337 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 ARF6P62330 175 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 HIST1H3AP68431 136 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 SLC35A2P78381 396 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 C2orf68Q2NKX9 166 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 HIST2H3PS2Q5TEC6 136 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 DHRS7BQ6IAN0 325 aaPredicted RBP11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 LAIR2Q6ISS4 152 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 SLC18B1Q6NT16 456 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 COLCA1Q6ZS62 124 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 KCTD8Q6ZWB6 473 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 HIST2H3AQ71DI3 136 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 C1QL4Q86Z23 238 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 SLC26A10Q8NG04 563 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 OR52J3Q8NH60 311 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 LINC01006Q8NI28 216 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 FAM110DQ8TAY7 271 aaPredicted RBP11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 FCGR1BQ92637 280 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 ZNF799Q96GE5 643 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 NMNAT3Q96T66 252 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 IFT27Q9BW83 186 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 ONECUT1Q9UBC0 465 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 B9D1Q9UPM9 204 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
CDC42EP1-204ENST00000434728 IGLV1-36A0A0B4J1U3 117 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 A0A0U1RQK1 487 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 A0A1B0GWJ7 208 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 CD300LBA8K4G0 201 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 NOL3O60936 208 aaKnown RBP11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 TXNDC12O95881 172 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 ECDO95905 644 aaPredicted RBP11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 OSMP13725 252 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 MMP9P14780 707 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 ZNF823P16415 610 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 TMBIM6P55061 237 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 CDC42P60953 191 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 HOXA4Q00056 320 aaPredicted RBP11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 LSAMPQ13449 338 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 ASPHD2Q6ICH7 369 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 BTN2A1Q7KYR7 527 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 RHOUQ7L0Q8 258 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 ERI1Q8IV48 349 aaKnown RBP11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 SPARTQ8N0X7 666 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 OR6V1Q8N148 313 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 SPERTQ8NA61 448 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 AQP11Q8NBQ7 271 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 OR4K13Q8NH42 304 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 MUL1Q969V5 352 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 SMURF1Q9HCE7 757 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 C14orf119Q9NWQ9 140 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 N6AMT1Q9Y5N5 214 aa11.09□□□□□ -0.63
CDC42EP1-204ENST00000434728 TRBV4-1A0A0J9YWV2 114 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 CCDC160A6NGH7 325 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 ZAR1LA6NP61 321 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 DVL1O14640 695 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 OR10H3O60404 316 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 PAHP00439 452 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 FBP1P09467 338 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 HIST1H1CP16403 213 aaKnown RBP11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 POLR2IP36954 125 aaKnown RBP11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 IER3P46695 156 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 OMPP47874 163 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 CRISP1P54107 249 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 TAF13Q15543 124 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 PRSS48Q7RTY5 328 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 NAA40Q86UY6 237 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 CMTM4Q8IZR5 234 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 OR8S1Q8NH09 359 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 OR2AE1Q8NHA4 323 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 RHOXF1Q8NHV9 184 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 TRUB1Q8WWH5 349 aaKnown RBP11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 COPS4Q9BT78 406 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 OR52D1Q9H346 318 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 FN3KQ9H479 309 aa11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 PRKDCP78527 4128 aaKnown RBP11.08□□□□□ -0.64
CDC42EP1-204ENST00000434728 A0A1B0GVI7 797 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 ANKRD61A6NGH8 418 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 BHLHE40O14503 412 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 RGS10O43665 173 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 CLPXO76031 633 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 TSPAN15O95858 294 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 HTR1AP08908 422 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 CSF1P09603 554 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 GABRB1P18505 474 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 GRK5P34947 590 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 FXYD6P3P58550 94 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
CDC42EP1-204ENST00000434728 SNRPGP62308 76 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms