RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 CDC6Q99741 560 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 DPCDQ9BVM2 203 aaPredicted RBP12.18□□□□□ -0.46
HOXC4-202ENST00000430889 HES7Q9BYE0 225 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 IFT46Q9NQC8 304 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 NCOR1O75376 2440 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 FREM2Q5SZK8 3169 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 AHCTF1Q8WYP5 2266 aa12.18□□□□□ -0.46
HOXC4-202ENST00000430889 CELA3AP09093 270 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 MMP7P09237 267 aaPredicted RBP12.17□□□□□ -0.46
HOXC4-202ENST00000430889 B4GALT1P15291 398 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 HLA-GP17693 338 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 PSG4Q00888 419 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
HOXC4-202ENST00000430889 OPCMLQ14982 345 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 STK11Q15831 433 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 NKPD1Q17RQ9 610 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 ABHD17BQ5VST6 288 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 FAHD2BQ6P2I3 314 aaPredicted RBP12.17□□□□□ -0.46
HOXC4-202ENST00000430889 C17orf107Q6ZR85 190 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 CD163Q86VB7 1156 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 HOGA1Q86XE5 327 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 TNFAIP8L1Q8WVP5 186 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 ST8SIA4Q92187 359 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 ELMOD3Q96FG2 381 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 FAHD2AQ96GK7 314 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 ARHGAP5-AS1Q96IT6 56 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 GPER1Q99527 375 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
HOXC4-202ENST00000430889 LINC00470Q9BZP3 86 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 IL17BQ9UHF5 180 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 PLEKHA6Q9Y2H5 1048 aa12.17□□□□□ -0.46
HOXC4-202ENST00000430889 STMND1H3BQB6 276 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 CA11O75493 328 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 CRTAPO75718 401 aaPredicted RBP12.16□□□□□ -0.46
HOXC4-202ENST00000430889 CD8AP01732 235 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF708P17019 499 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 NFYAP23511 347 aaPredicted RBP12.16□□□□□ -0.46
HOXC4-202ENST00000430889 SEC61A1P61619 476 aaKnown RBP12.16□□□□□ -0.46
HOXC4-202ENST00000430889 RIPPLY1Q0D2K3 151 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 GK2Q14410 553 aaPredicted RBP12.16□□□□□ -0.46
HOXC4-202ENST00000430889 OR1C1Q15619 314 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 MICBQ29980 383 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 SCGB2B2Q4G0G5 96 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 DMRTC1Q5HYR2 192 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 PDSS1Q5T2R2 415 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 HES3Q5TGS1 186 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 DHRS13Q6UX07 377 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 TMED4Q7Z7H5 227 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF100Q8IYN0 542 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 PNLDC1Q8NA58 520 aaKnown RBP12.16□□□□□ -0.46
HOXC4-202ENST00000430889 OR5M8Q8NGP6 311 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 AKR7LQ8NHP1 331 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 CST11Q9H112 138 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 PCNX2A6NKB5 2137 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 TRAV14DV4A0A0A6YYC5 116 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 CSN2P05814 226 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 MGMTP16455 207 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 CBX5P45973 191 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 AIMP2Q13155 320 aaKnown RBP12.16□□□□□ -0.46
HOXC4-202ENST00000430889 ACTBL2Q562R1 376 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 LYG2Q86SG7 212 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 SKA3Q8IX90 412 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 MDS2Q8NDY4 140 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 SEMA6DQ8NFY4 1073 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 OR5D18Q8NGL1 313 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 OR2AE1Q8NHA4 323 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 NPRL2Q8WTW4 380 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 FBXW5Q969U6 566 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 SPSB1Q96BD6 273 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 REEP6Q96HR9 211 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 TTTY12Q9BZ98 90 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 ZNF391Q9UJN7 358 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 TIMM10BQ9Y5J6 103 aa12.16□□□□□ -0.46
HOXC4-202ENST00000430889 FREM1Q5H8C1 2179 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 hCG_38984A0A1B0GV85 526 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 LEUTXA8MZ59 168 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 RPL36A-HNRNPH2H7BZ11 118 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 M0R233 179 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 EFSO43281 561 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 IFNA7P01567 189 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 PATE4P0C8F1 98 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 FCGR2AP12318 317 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 CLLU1Q5K131 121 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 CLVS2Q5SYC1 327 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 TSPO2Q5TGU0 170 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 LPCAT3Q6P1A2 487 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 LHFPL1Q86WI0 220 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 STEAP2Q8NFT2 490 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 OR4K15Q8NH41 348 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 MITD1Q8WV92 249 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 PIGTQ969N2 578 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 IP6K3Q96PC2 410 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 PECRQ9BY49 303 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 CLEC4MQ9H2X3 399 aaPredicted RBP12.15□□□□□ -0.46
HOXC4-202ENST00000430889 TMEM9BQ9NQ34 198 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 B4GALT7Q9UBV7 327 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 ATPIF1Q9UII2 106 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms