RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CNRIP1Q96F85 164 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 GSX1Q9H4S2 264 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 TRDCB7Z8K6 153 aa12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 H0Y8X5 98 aa12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 FCGR2CP31995 323 aa12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 MRGPRDQ8TDS7 321 aa12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 MRPS18CQ9Y3D5 142 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 STRAPQ9Y3F4 350 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-203ENST00000428982 FAM230AA0A1W2PPH8 454 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 GSTP1P09211 210 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 HOXC12P31275 282 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR3A2P47893 321 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 NOVA1P51513 510 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 SLC35A1P78382 337 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ARL6IP1Q15041 203 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 CDK5R1Q15078 307 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 MDGA2Q7Z553 956 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR4K13Q8NH42 304 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 PATZ1Q9HBE1 687 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 NAGKQ9UJ70 344 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 PAM16Q9Y3D7 125 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 CCDC163A0A0D9SF12 145 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ERGP11308 486 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 RPL12P30050 165 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ACAA2P42765 397 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 CRMP1Q14194 572 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZIC1Q15915 447 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 HLA-DQA1Q5Y7H0 255 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR5L1Q8NGL2 311 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR5AK2Q8NH90 309 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 Q8WTZ3 238 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 C19orf53Q9UNZ5 99 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 LAMP3Q9UQV4 416 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZNF724A8MTY0 619 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 TMEM238C9JI98 176 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 FTCDNL1E5RQL4 147 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 TBX6O95947 436 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 MDKP21741 143 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 PRAMEF20Q5VT98 475 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 SLC16A11Q8NCK7 471 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR2A1Q8NGT9 310 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 TOMM40LQ969M1 308 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 SDF2Q99470 211 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 SAMD10Q9BYL1 202 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 CTNSO60931 367 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 IRF2P14316 349 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 EGR3Q06889 387 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 FIGLAQ6QHK4 219 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 TMEM108Q6UXF1 575 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZNF547Q8IVP9 402 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 RNF2Q99496 336 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 KIR3DX1Q9H7L2 352 aa12.92□□□□□ -0.34
SYNGAP1-203ENST00000428982 GBF1Q92538 1859 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 GPR75O95800 540 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 HPRT1P00492 218 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 GRPRP30550 384 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 CEACAM6P40199 344 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 LY6G6FQ5SQ64 297 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 PRSS54Q6PEW0 395 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 ADAMTS18Q8TE60 1221 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 SLC25A38Q96DW6 304 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 COX14Q96I36 57 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 DUSP15Q9H1R2 295 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 CEP350Q5VT06 3117 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 DOK2O60496 412 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 TACR3P29371 465 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 PTGER1P34995 402 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 STEAP1Q9UHE8 339 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 IER3IP1Q9Y5U9 82 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 TMIGD3P0DMS9 266 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 CXCR1P25024 350 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR1L6Q8NGR2 347 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZNF563Q8TA94 476 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 GPX8Q8TED1 209 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 TNFRSF14Q92956 283 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZMAT3Q9HA38 289 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 RAB22AQ9UL26 194 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 HSF4Q9ULV5 492 aa12.91□□□□□ -0.34
SYNGAP1-203ENST00000428982 A0A1W2PPC4 97 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 CEACAM5P06731 702 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR5G3P0C626 314 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 IL22RA2Q969J5 263 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 SLC35E1Q96K37 410 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 LYRM4Q9HD34 91 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 DUX1O43812 170 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 GABRA4P48169 554 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 RPL23AP62750 156 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 ID2Q02363 134 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZNF750Q32MQ0 723 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 LEG1Q6P5S2 330 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 ANKRD16Q6P6B7 361 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 ZNF761Q86XN6 746 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR4N5Q8IXE1 308 aa12.9□□□□□ -0.34
SYNGAP1-203ENST00000428982 DND1Q8IYX4 353 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms