RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SAA4P35542 130 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 MNAT1P51948 309 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 ZNF121P58317 390 aaPredicted RBP13.53□□□□□ -0.24
VARS-216ENST00000428445 DGUOKQ16854 277 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 DMRTC1Q5HYR2 192 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 LINC01590Q5TEZ4 76 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 STUMQ69YW2 141 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 METAP1DQ6UB28 335 aaPredicted RBP13.53□□□□□ -0.24
VARS-216ENST00000428445 CPLX4Q7Z7G2 160 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 PAPOLGQ9BWT3 736 aaKnown RBP13.53□□□□□ -0.24
VARS-216ENST00000428445 NMNAT2Q9BZQ4 307 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 HAO2Q9NYQ3 351 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 TAS2R1Q9NYW7 299 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 ACTR3BQ9P1U1 418 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 LYVE1Q9Y5Y7 322 aa13.53□□□□□ -0.24
VARS-216ENST00000428445 BTBD17A6NE02 478 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 FAM183AA6NL82 134 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 ZNF850A8MQ14 1090 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 EEF1B2P24534 225 aaKnown RBP13.52□□□□□ -0.25
VARS-216ENST00000428445 HSD11B1P28845 292 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 TGFBR2P37173 567 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 NAA10P41227 235 aaPredicted RBP13.52□□□□□ -0.25
VARS-216ENST00000428445 MAGEA2P43356 314 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 GK3PQ14409 553 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 C2orf68Q2NKX9 166 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 LRRC10Q5BKY1 277 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 ZNF770Q6IQ21 691 aaPredicted RBP13.52□□□□□ -0.25
VARS-216ENST00000428445 ERI1Q8IV48 349 aaKnown RBP13.52□□□□□ -0.25
VARS-216ENST00000428445 CMTM4Q8IZR5 234 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 LYG1Q8N1E2 194 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 OR2T33Q8NG76 320 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 OR52H1Q8NGJ2 320 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 OR6N2Q8NGY6 317 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 ITFG2Q969R8 447 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 C12orf43Q96C57 262 aaKnown RBP13.52□□□□□ -0.25
VARS-216ENST00000428445 ITPKCQ96DU7 683 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 GAFA1Q96PS6 74 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 ABHD6Q9BV23 337 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 VNN3Q9NY84 501 aa13.52□□□□□ -0.25
VARS-216ENST00000428445 CAB39Q9Y376 341 aaPredicted RBP13.52□□□□□ -0.25
VARS-216ENST00000428445 H3BUX3 64 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 CCNB2O95067 398 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 PAHP00439 452 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 IFNGP01579 166 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 ACKR3P25106 362 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 ATPAF1Q5TC12 328 aaPredicted RBP13.51□□□□□ -0.25
VARS-216ENST00000428445 HCP5Q6MZN7 132 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 CD300LDQ6UXZ3 194 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 CYP2R1Q6VVX0 501 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 KCTD8Q6ZWB6 473 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 SHFQ7M4L6 423 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 ARHGAP24Q8N264 748 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 FTMTQ8N4E7 242 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 AQP11Q8NBQ7 271 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 CSNK2A3Q8NEV1 391 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 PIGCQ92535 297 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 OTULINQ96BN8 352 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 PGAM5Q96HS1 289 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 RAB3IPQ96QF0 476 aaPredicted RBP13.51□□□□□ -0.25
VARS-216ENST00000428445 DGCR6LQ9BY27 220 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 DNTTIP1Q9H147 329 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 TLNRD1Q9H1K6 362 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 MAGIXQ9H6Y5 334 aa13.51□□□□□ -0.25
VARS-216ENST00000428445 SLC25A10Q9UBX3 287 aaPredicted RBP13.51□□□□□ -0.25
VARS-216ENST00000428445 RHBDL1O75783 438 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 NDUFB7P17568 137 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 POU1F1P28069 291 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 GABRA5P31644 462 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 GNALP38405 381 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 GABRA2P47869 451 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 ERVFRD-1P60508 538 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 MXRA7P84157 204 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 PRDX4Q13162 271 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 MICAQ29983 383 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 ZNF788Q6ZQV5 615 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 GALNT4Q8N4A0 578 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 ANGPTL6Q8NI99 470 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 C8orf46Q8TAG6 207 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 DUS3LQ96G46 650 aaKnown RBP13.5□□□□□ -0.25
VARS-216ENST00000428445 AJUBAQ96IF1 538 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 LYZL4Q96KX0 146 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 SSX3Q99909 188 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 MICU1Q9BPX6 476 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 MUC13Q9H3R2 512 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 RGCCQ9H4X1 137 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 ABCB9Q9NP78 766 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 U3KQV3 271 aa13.5□□□□□ -0.25
VARS-216ENST00000428445 A0A1W2PQ09 198 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 MEGF11A6BM72 1044 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 DCTN3O75935 186 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 UBE2E1P51965 193 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 DEFB107AQ8IZN7 70 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 IQCF1Q8N6M8 205 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 ZNRF1Q8ND25 227 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 RNF133Q8WVZ7 376 aa13.49□□□□□ -0.25
VARS-216ENST00000428445 HPSE2Q8WWQ2 592 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms