RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PSG6Q00889 435 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF273Q14593 569 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 PPA1Q15181 289 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 DMRTC1Q5HYR2 192 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 PLPP7Q8NBV4 271 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 STK35Q8TDR2 534 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 GIMAP5Q96F15 307 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 HRASLSQ9HDD0 168 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 B3GAT1Q9P2W7 334 aa9.48□□□□□ -0.89
TCOF1-204ENST00000427724 RALYQ9UKM9 306 aaKnown RBP9.48□□□□□ -0.89
TCOF1-204ENST00000427724 DSPPQ9NZW4 1301 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 GABARAPH6UMI1 98 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 ABCD4O14678 606 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 FBXO24O75426 580 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 COX6A1P12074 109 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 RAB6AP20340 208 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 S100A12P80511 92 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 SRSF6Q13247 344 aaKnown RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 HFEQ30201 348 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 THEM4Q5T1C6 240 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 COX15Q7KZN9 410 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 OR2Z1Q8NG97 314 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 SSX3Q99909 188 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 PRO3102Q9H379 93 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 PLK3Q9H4B4 646 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 C14orf166Q9Y224 244 aaKnown RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 A0A0B4J293 547 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 IFITM5A6NNB3 132 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 SCGNO76038 276 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 HPXP02790 462 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 TPT1P13693 172 aaKnown RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 TNFRSF1AP19438 455 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 MEOX2P50222 304 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 TMEM91Q6ZNR0 172 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 BHLHA15Q7RTS1 189 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 GLRX5Q86SX6 157 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 FAM185AQ8N0U4 392 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 OR11H4Q8NGC9 324 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 PELI1Q96FA3 418 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 MOKQ9UQ07 419 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 EYSQ5T1H1 3165 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 TSC2P49815 1807 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 A0A0D9SG52 128 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 M0QYG6 137 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 BHLHE40O14503 412 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 CCL2P13500 99 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 RBMXP38159 391 aaKnown RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 ZFP36L1Q07352 338 aaKnown RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 CD226Q15762 336 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 NHLRC1Q6VVB1 395 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 COMTD1Q86VU5 262 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 CXorf67Q86X51 503 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 ASB17Q8WXJ9 295 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 GPR137Q96N19 417 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 SCGB3A2Q96PL1 93 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 SORCS2Q96PQ0 1159 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 SYT3Q9BQG1 590 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF629Q9UEG4 869 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-204ENST00000427724 TRAPPC2LQ9UL33 140 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 MEMO1Q9Y316 297 aa9.47□□□□□ -0.89
TCOF1-204ENST00000427724 CENPVL1A0A0U1RR11 272 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 ADRA2AP08913 450 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 PRF1P14222 555 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 FUT7Q11130 342 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 HLXQ14774 488 aaPredicted RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 SSX2Q16385 188 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 LINC00518Q8N0U6 118 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 BPIFB2Q8N4F0 458 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 OR51S1Q8NGJ8 323 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 VSTM2LQ96N03 204 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 UCN2Q96RP3 112 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 NKX3-1Q99801 234 aaPredicted RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 ST6GALNAC5Q9BVH7 336 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 PPP1R3EQ9H7J1 279 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 EXOGQ9Y2C4 368 aaKnown RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 PIEZO2Q9H5I5 2752 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 A0A1W2PPH5 198 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 RPS10-NUDT3A0A1W2PQS6 291 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 RPS10P46783 165 aaKnown RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 BAMBIQ13145 260 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 TBR1Q16650 682 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 CDH26Q8IXH8 852 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 NPAS1Q99742 590 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 CMSS1Q9BQ75 279 aaKnown RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 PIGMQ9H3S5 423 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 MEPEQ9NQ76 525 aaPredicted RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 DTX4Q9Y2E6 619 aa9.46□□□□□ -0.89
TCOF1-204ENST00000427724 SIRT4Q9Y6E7 314 aaPredicted RBP9.46□□□□□ -0.89
TCOF1-204ENST00000427724 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 AHRRA9YTQ3 701 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 PLPP2O43688 288 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 ZG16O60844 167 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 KNG1P01042 644 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 AKR1C3P42330 323 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 TAS2R20P59543 309 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.9
TCOF1-204ENST00000427724 IL13RA1P78552 427 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 GGTLC2Q14390 218 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 PCOLCEQ15113 449 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms