RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ELOVL1Q9BW60 279 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 SIRT3Q9NTG7 399 aaPredicted RBP5.16□□□□□ -1.58
HERC4-206ENST00000427635 C19orf67A6NJJ6 358 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ADAM10O14672 748 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 LYZL6O75951 148 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 HSD17B1P14061 328 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 NME1P15531 152 aaKnown RBP5.16□□□□□ -1.58
HERC4-206ENST00000427635 RAB5AP20339 215 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 LOXL3P58215 753 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 FOXK2Q01167 660 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ILKQ13418 452 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 FAM53BQ14153 422 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 PCK2Q16822 640 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 MOGAT2Q3SYC2 334 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 Q6ZS52 159 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ABI3BPQ7Z7G0 1075 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 LRRC56Q8IYG6 542 aaPredicted RBP5.16□□□□□ -1.58
HERC4-206ENST00000427635 LYG1Q8N1E2 194 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 PELI3Q8N2H9 469 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 OLIG1Q8TAK6 271 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 TMED6Q8WW62 240 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 MRAP2Q96G30 205 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 BANF2Q9H503 90 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ZNF552Q9H707 407 aaPredicted RBP5.16□□□□□ -1.58
HERC4-206ENST00000427635 TAS2R5Q9NYW4 299 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 PSENENQ9NZ42 101 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 CNOT2Q9NZN8 540 aaKnown RBP5.16□□□□□ -1.58
HERC4-206ENST00000427635 DOT1LQ8TEK3 1739 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 A0A0B4J2A0 478 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 TMEM202A6NGA9 273 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 GPR31O00270 319 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 GSTZ1O43708 216 aaPredicted RBP5.16□□□□□ -1.58
HERC4-206ENST00000427635 SELENOFO60613 162 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 FGF7P21781 194 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ZBTB25P24278 435 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ARRB2P32121 409 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ATP5J2P56134 94 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 CEACAM16Q2WEN9 425 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 GGNBP1Q5YKI7 109 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ZNF793Q6ZN11 406 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 LINC00518Q8N0U6 118 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 HSD17B11Q8NBQ5 300 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 OR1L4Q8NGR5 311 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ZIC5Q96T25 663 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 GABRG3Q99928 467 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 PCGF1Q9BSM1 259 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ZDHHC18Q9NUE0 388 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 OR6C3Q9NZP0 311 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 SHPKQ9UHJ6 478 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 B3GALT5Q9Y2C3 310 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 MYH1P12882 1939 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 SYT5O00445 386 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 CR2P20023 1033 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ACP1P24666 158 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 PTGFRP43088 359 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 GFERP55789 205 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 GNG3P63215 75 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 HBA1P69905 142 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 LINC01559Q495D7 138 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 NRN1LQ496H8 165 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 CYB5R2Q6BCY4 276 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 FAHD1Q6P587 224 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 FA2HQ7L5A8 372 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ANKRD37Q7Z713 158 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 CALHM3Q86XJ0 350 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 SIAH1Q8IUQ4 282 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 LACC1Q8IV20 430 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 OR51J1Q9H342 316 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 VAPAQ9P0L0 249 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 POMT2Q9UKY4 750 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 CCL27Q9Y4X3 112 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 KCNAB3O43448 404 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ZNF735P0CB33 412 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 MMP15P51511 669 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 TPPP2P59282 170 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 GLYATL3Q5SZD4 288 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 PRR27Q6MZM9 219 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 CYS1Q717R9 158 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 RTN4RL2Q86UN3 420 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 OSR2Q8N2R0 312 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 TMEM255BQ8WV15 326 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 PHYHIPQ92561 330 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 ADGRG7Q96K78 797 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 LHX9Q9NQ69 397 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 AP5S1Q9NUS5 200 aa5.16□□□□□ -1.58
HERC4-206ENST00000427635 DCAF13Q9NV06 445 aaKnown RBP5.16□□□□□ -1.58
HERC4-206ENST00000427635 A0A1W2PR80 420 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 SLC25A5P05141 298 aaKnown RBP5.15□□□□□ -1.58
HERC4-206ENST00000427635 OR4E1P0C645 316 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 HIST1H1EP10412 219 aaKnown RBP5.15□□□□□ -1.58
HERC4-206ENST00000427635 HLCSP50747 726 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 HTR4Q13639 388 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 SPCS2Q15005 226 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 TRMT12Q53H54 448 aaKnown RBP5.15□□□□□ -1.58
HERC4-206ENST00000427635 SLCO4C1Q6ZQN7 724 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 UBE2DNLQ8IWF7 75 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 BOD1L2Q8IYS8 172 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 EIF4E3Q8N5X7 224 aaKnown RBP5.15□□□□□ -1.58
HERC4-206ENST00000427635 OR1F12Q8NHA8 337 aa5.15□□□□□ -1.58
HERC4-206ENST00000427635 PATE1Q8WXA2 126 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms