RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 FCN1O00602 326 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 TAF1P21675 1872 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 CD3DP04234 171 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 GUSBP08236 651 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 FUT3P21217 361 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 ARRDC3Q96B67 414 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM167BQ9NRX6 74 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 OR1A1Q9P1Q5 309 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 WSB1Q9Y6I7 421 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 M0R1X1 148 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 OR2J2O76002 312 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 RPA2P15927 270 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 MLF2Q15773 248 aaPredicted RBP13.04□□□□□ -0.32
PTPN13-203ENST00000427191 MARCH1Q8TCQ1 289 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 PERPQ96FX8 193 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 SEMA7AO75326 666 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 TUSC1Q2TAM9 212 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 MYPOPQ86VE0 399 aaPredicted RBP13.04□□□□□ -0.32
PTPN13-203ENST00000427191 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 TAAR3PQ9P1P4 343 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 BMPR1BO00238 502 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
PTPN13-203ENST00000427191 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 MYOZ1Q9NP98 299 aaPredicted RBP13.04□□□□□ -0.32
PTPN13-203ENST00000427191 FBXO4Q9UKT5 387 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM238LA0A1B0GVL6 79 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 A6NJY4 79 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 FAHD1Q6P587 224 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 ADTRPQ96IZ2 230 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 SH2D2AQ9NP31 389 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 GPX5O75715 221 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 FAM87AP0C7U9 286 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 PMS2P11Q13670 270 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 LRP11Q86VZ4 500 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 HIST1H1BP16401 226 aaKnown RBP13.04□□□□□ -0.32
PTPN13-203ENST00000427191 ATF1P18846 271 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 RGS7BPQ6MZT1 257 aaPredicted RBP13.04□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM88Q6PEY1 159 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 ALKAL1Q6UXT8 129 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 OR5AS1Q8N127 324 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 OR2G2Q8NGZ5 317 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 GAL3ST2Q9H3Q3 398 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 AKIP1Q9NQ31 210 aa13.04□□□□□ -0.32
PTPN13-203ENST00000427191 HMSDA8MTL9 139 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 FUT7Q11130 342 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN13-203ENST00000427191 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
PTPN13-203ENST00000427191 MTURNQ8N3F0 131 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 HINT3Q9NQE9 182 aaKnown RBP13.03□□□□□ -0.32
PTPN13-203ENST00000427191 CA10Q9NS85 328 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF775Q96BV0 537 aaPredicted RBP13.03□□□□□ -0.32
PTPN13-203ENST00000427191 OR8B4Q96RC9 309 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 Q9N2K0 584 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 C5orf52A6NGY3 159 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 CRYABP02511 175 aaKnown RBP13.03□□□□□ -0.32
PTPN13-203ENST00000427191 POLR2IP36954 125 aaKnown RBP13.03□□□□□ -0.32
PTPN13-203ENST00000427191 NOXO1Q8NFA2 376 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 ADAMTS5Q9UNA0 930 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF195O14628 629 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 SLC25A1P53007 311 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 PRSS42Q7Z5A4 293 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 WDR89Q96FK6 387 aaPredicted RBP13.03□□□□□ -0.32
PTPN13-203ENST00000427191 AP5S1Q9NUS5 200 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 KRASP01116 189 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 SLC6A1P30531 599 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 NTHL1P78549 312 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 MAVSQ7Z434 540 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 FAM210BQ96KR6 192 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 GMLQ99445 158 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 PRRX2Q99811 253 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 CCL11P51671 97 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 CCR5P51681 352 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM99Q8N816 258 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 KIAA1958Q8N8K9 716 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 ANGPTL4Q9BY76 406 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM231Q9H6L2 316 aa13.03□□□□□ -0.32
PTPN13-203ENST00000427191 SSC5DA1L4H1 1573 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 CBR3O75828 277 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 SIRT7Q9NRC8 400 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 SCN8AQ9UQD0 1980 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 MBTPS2O43462 519 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 BCL3P20749 454 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 CEACAM3P40198 252 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 CD200P41217 278 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 RDH5Q92781 318 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.32
PTPN13-203ENST00000427191 HOXC11O43248 304 aaPredicted RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 ZNF121P58317 390 aaPredicted RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 FABP5Q01469 135 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 GPANK1O95872 356 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 APEHP13798 732 aaKnown RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 CSF2RBP32927 897 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 JMJD6Q6NYC1 403 aaPredicted RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 BAHD1Q8TBE0 780 aaPredicted RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
PTPN13-203ENST00000427191 GFYI3L273 518 aa13.02□□□□□ -0.33
PTPN13-203ENST00000427191 PRRX1P54821 245 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms