RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 GTF2A1P52655 376 aaPredicted RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 GBX2P52951 348 aaPredicted RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ACTA2P62736 377 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ACTG2P63267 376 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 TNFAIP6P98066 277 aaPredicted RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 MAB21L1Q13394 359 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ALKBH1Q13686 389 aaKnown RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 IRF3Q14653 427 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 CLEC12BQ2HXU8 276 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 GFOD2Q3B7J2 385 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ZMAT1Q5H9K5 638 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 FAM209AQ5JX71 171 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 Q5PR19 223 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 RBM48Q5RL73 367 aaKnown RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 BCL2L15Q5TBC7 163 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 XAF1Q6GPH4 301 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 SPNS3Q6ZMD2 512 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 TMPRSS11AQ6ZMR5 421 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 FAM220AQ7Z4H9 259 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 TGIF2LYQ8IUE0 185 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 RDH10Q8IZV5 341 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 STX19Q8N4C7 294 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 KLHL36Q8N4N3 616 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF525Q8N782 197 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 WFDC11Q8NEX6 87 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 OR2Z1Q8NG97 314 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 OR52N1Q8NH53 320 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 RPS4Y2Q8TD47 263 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 RDH5Q92781 318 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 YIPF5Q969M3 257 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ELMOD3Q96FG2 381 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 MYCBPQ99417 103 aaPredicted RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 CDCA4Q9BXL8 241 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 SLC22A4Q9H015 551 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 CHCHD3Q9NX63 227 aaKnown RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 MRPL15Q9P015 296 aaKnown RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 IL19Q9UHD0 177 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 GTF2A1LQ9UNN4 478 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 RHBDD3Q9Y3P4 386 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 SIRT4Q9Y6E7 314 aaPredicted RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 DYSFO75923 2080 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 IGHV1-69-2A0A0G2JMI3 117 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 ANKRD30BLA7E2S9 258 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 VWC2LB2RUY7 222 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 LMX1BO60663 402 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 DHRS3O75911 302 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 PTBP3O95758 552 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 ISG15P05161 165 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MYL12AP19105 171 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 GIFP27352 417 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 RBMXP38159 391 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 PMELP40967 661 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 CD200P41217 278 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 PDLIM4P50479 330 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 DSCR9P59020 149 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MRPS11P82912 194 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 RIPPLY1Q0D2K3 151 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MRPL28Q13084 256 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 HNRNPA0Q13151 305 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MED21Q13503 144 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 RIN1Q13671 783 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 OR8G1Q15617 311 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 ODF4Q2M2E3 257 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 TMEM244Q5VVB8 128 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 TMEM42Q69YG0 159 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 RPL22L1Q6P5R6 122 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 DOK3Q7L591 496 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 KLBQ86Z14 1044 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 CSNK2A3Q8NEV1 391 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 SEMA6DQ8NFY4 1073 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 OR10AD1Q8NGE0 317 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 OR10AC1Q8NH08 325 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 C10orf105Q8TEF2 133 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 ITLN1Q8WWA0 313 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 PIGCQ92535 297 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MYDGFQ969H8 173 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 FAM71F1Q96KD3 344 aaPredicted RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 Q96MF0 132 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 OR2V2Q96R30 315 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 YTHDF1Q9BYJ9 559 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 EGLN1Q9GZT9 426 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 FGF23Q9GZV9 251 aaPredicted RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 Q9H521 79 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MYOZ1Q9NP98 299 aaPredicted RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 DECR2Q9NUI1 292 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 DCAF16Q9NXF7 216 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 LSM2Q9Y333 95 aaKnown RBP6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MPC1Q9Y5U8 109 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 CACNG2Q9Y698 323 aa6.26□□□□□ -1.41
LINC01049-201ENST00000426840 MED13LQ71F56 2210 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 IGHV4-30-2A0A087WSY4 118 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 A0A096LNT2 108 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 TRBV2A0A0J9YWF9 115 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 ZNF816-ZNF321PA0A0X1KG74 233 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 A0A1B0GVI7 797 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 TRIM64A6NGJ6 449 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 TRIM64BA6NI03 449 aa6.25□□□□□ -1.41
LINC01049-201ENST00000426840 A6NIN4 97 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms