RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 Q6ZT83 130 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 CHST4Q8NCG5 386 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 OR10R2Q8NGX6 335 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 ZNF75AQ96N20 296 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 TMEM59Q9BXS4 323 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 MCUBQ9NWR8 336 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 CRYABP02511 175 aaKnown RBP22.94■■□□□ 1.26
LDB1-202ENST00000425280 PRKACBP22694 351 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 TGFBR3Q03167 851 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 FOXF2Q12947 444 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 CDNFQ49AH0 187 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 Q6ZTK2 550 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 OR6K3Q8NGY3 331 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 OR6F1Q8NGZ6 308 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 DEDD2Q8WXF8 326 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 ABHD17AQ96GS6 310 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 GPR137Q96N19 417 aa22.94■■□□□ 1.26
LDB1-202ENST00000425280 REPIN1Q9BWE0 567 aaKnown RBP22.94■■□□□ 1.26
LDB1-202ENST00000425280 APLNRP35414 380 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 EIF2B2P49770 351 aaKnown RBP22.93■■□□□ 1.26
LDB1-202ENST00000425280 MTCP1P56278 107 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 GK2Q14410 553 aaPredicted RBP22.93■■□□□ 1.26
LDB1-202ENST00000425280 ZNF816-ZNF321PA0A0X1KG74 233 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 RAD51DO75771 328 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 LYZL6O75951 148 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 CNOT4O95628 575 aaKnown RBP22.93■■□□□ 1.26
LDB1-202ENST00000425280 FCER2P06734 321 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 CHRM2P08172 466 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 ACTBP60709 375 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 ZP1P60852 638 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 ACTG1P63261 375 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 STARD10Q9Y365 291 aa22.93■■□□□ 1.26
LDB1-202ENST00000425280 MGAQ8IWI9 3026 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 IGKV1-27A0A075B6S5 117 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 FAM230AA0A1W2PPH8 454 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 DHFRP00374 187 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 NGFP01138 241 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 H2AFB2P0C5Z0 115 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 GTF2F2P13984 249 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 PSMB1P20618 241 aaKnown RBP22.92■■□□□ 1.26
LDB1-202ENST00000425280 ZBTB37Q5TC79 503 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 RTN4RL2Q86UN3 420 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 OR4C16Q8NGL9 310 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 SELENOIQ9C0D9 397 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 CST11Q9H112 138 aa22.92■■□□□ 1.26
LDB1-202ENST00000425280 K7ENP7 123 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 SERPINA5P05154 406 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 MELTFP08582 738 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 MALLQ13021 153 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 INO80CQ6PI98 192 aaPredicted RBP22.91■■□□□ 1.26
LDB1-202ENST00000425280 SEM1Q6ZVN7 128 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 OR10K1Q8NGX5 313 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 PIGCQ92535 297 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 C20orf85Q9H1P6 137 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 NEK6Q9HC98 313 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 KCNN3Q9UGI6 736 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 CACNA1GO43497 2377 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 GNB3P16520 340 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 FAUP35544 74 aaKnown RBP22.91■■□□□ 1.26
LDB1-202ENST00000425280 WNT5AP41221 380 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 GABRA6Q16445 453 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 TBR1Q16650 682 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 CDH24Q86UP0 819 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 OR4D10Q8NGI6 311 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 ST6GAL2Q96JF0 529 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 PTTG3PQ9NZH4 202 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 TP53TG5Q9Y2B4 290 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 GTF3C1Q12789 2109 aa22.91■■□□□ 1.26
LDB1-202ENST00000425280 A0A0A6YYJ9 748 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 SOCS1O15524 211 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 AKAIN1P0CW23 69 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 RAG2P55895 527 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 RPS27AP62979 156 aaKnown RBP22.9■■□□□ 1.26
LDB1-202ENST00000425280 HLXQ14774 488 aaPredicted RBP22.9■■□□□ 1.26
LDB1-202ENST00000425280 LHFPL2Q6ZUX7 228 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 MOB3CQ70IA8 216 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 FJX1Q86VR8 437 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 SLC30A7Q8NEW0 376 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 OR56B4Q8NH76 319 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 BORCS8Q96FH0 119 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 S100A13Q99584 98 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 URM1Q9BTM9 101 aaKnown RBP22.9■■□□□ 1.26
LDB1-202ENST00000425280 POFUT1Q9H488 388 aa22.9■■□□□ 1.26
LDB1-202ENST00000425280 MBD3L4A6NDZ8 208 aaPredicted RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 MBD3L3A6NE82 208 aaPredicted RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 MBD3L5A6NJ08 208 aaPredicted RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 A8MV72 311 aaPredicted RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 CD3DP04234 171 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 SERPINA2P20848 420 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 RBP2P50120 134 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 LINC00303Q3SY05 128 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 MRPL21Q7Z2W9 205 aaKnown RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 OR56B2PQ8NGI1 322 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 MBD3L2Q8NHZ7 208 aaPredicted RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 DVL3Q92997 716 aaPredicted RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 CPNE2Q96FN4 548 aaPredicted RBP22.89■■□□□ 1.26
LDB1-202ENST00000425280 ACTR6Q9GZN1 396 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 PLSCR4Q9NRQ2 329 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 NKIRAS2Q9NYR9 191 aa22.89■■□□□ 1.26
LDB1-202ENST00000425280 TNFSF13O75888 250 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms