RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 OR6K6Q8NGW6 343 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 OR2T4Q8NH00 348 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 LYZL4Q96KX0 146 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 RAB3IPQ96QF0 476 aaPredicted RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 SSX3Q99909 188 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 PAPOLGQ9BWT3 736 aaKnown RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 TSSK6Q9BXA6 273 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 GORASP2Q9H8Y8 452 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 SP140LQ9H930 580 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 SLC25A10Q9UBX3 287 aaPredicted RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 CAB39Q9Y376 341 aaPredicted RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 CDH10Q9Y6N8 788 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 IGKV1D-17A0A075B6S4 117 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 A0A1W2PQ09 198 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 FAM183AA6NL82 134 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 ZNF878C9JN71 531 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 PIN1P1O15428 100 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 XRCC2O43543 280 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 ANGPTL7O43827 346 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 CHST1O43916 411 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 SOX14O95416 240 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 FABP3P05413 133 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 CD28P10747 220 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 GRK5P34947 590 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 DDOSTP39656 456 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 NAA10P41227 235 aaPredicted RBP6.59□□□□□ -1.35
VIM-202ENST00000421459 GABRA2P47869 451 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 RAB13P51153 203 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 BMXP51813 675 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 SMIM11AP58511 58 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MXRA7P84157 204 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MZT1Q08AG7 82 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 PRDX4Q13162 271 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 PLA1AQ53H76 456 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 LRRC10Q5BKY1 277 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 KPRPQ5T749 579 aaPredicted RBP6.59□□□□□ -1.35
VIM-202ENST00000421459 ATPAF1Q5TC12 328 aaPredicted RBP6.59□□□□□ -1.35
VIM-202ENST00000421459 ZBTB37Q5TC79 503 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 LINC01590Q5TEZ4 76 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 CRIP3Q6Q6R5 217 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 ZNF788Q6ZQV5 615 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 KCTD8Q6ZWB6 473 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MKXQ8IYA7 352 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 DYNAPQ8N1N2 210 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 BEND2Q8NDZ0 799 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 ANGPTL6Q8NI99 470 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 C8orf46Q8TAG6 207 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 PIFOQ8TCI5 191 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MRAPQ8TCY5 172 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 NPRL2Q8WTW4 380 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 HPSE2Q8WWQ2 592 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 OR5P3Q8WZ94 311 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 CFHR4Q92496 578 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 PIGCQ92535 297 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 NKX3-1Q99801 234 aaPredicted RBP6.59□□□□□ -1.35
VIM-202ENST00000421459 ABHD6Q9BV23 337 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 NMNAT2Q9BZQ4 307 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 TLNRD1Q9H1K6 362 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MYLK2Q9H1R3 596 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MMP28Q9H239 520 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 SPAG4Q9NPE6 437 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 TBC1D23Q9NUY8 699 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 ARMC1Q9NVT9 282 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 VNN3Q9NY84 501 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MAB21L2Q9Y586 359 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
VIM-202ENST00000421459 MEX3AA1L020 520 aaKnown RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 OR2AT4A6NND4 320 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 H0YAE9 185 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 TNFRSF11BO00300 401 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 ARPC2O15144 300 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 SIGLEC5O15389 551 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 SNX3O60493 162 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 CCDC22O60826 627 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 GMNNO75496 209 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 ACAA1P09110 424 aaPredicted RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 PSG2P11465 335 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 JUNBP17275 347 aaPredicted RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 HSD11B1P28845 292 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 GNALP38405 381 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 IFNGR2P38484 337 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 OPRL1P41146 370 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 KIR2DS4P43632 304 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 GPM6AP51674 278 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 HCCSP53701 268 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 C11orf91Q3C1V1 193 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 TEX30Q5JUR7 227 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 ZNF770Q6IQ21 691 aaPredicted RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 Q6ZS46 218 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 LHFPL4Q7Z7J7 247 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 ERI1Q8IV48 349 aaKnown RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 FAM185AQ8N0U4 392 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 BATF2Q8N1L9 274 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 GALNT4Q8N4A0 578 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 IQCF1Q8N6M8 205 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 AQP11Q8NBQ7 271 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 OR52L1Q8NGH7 329 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 OR51G2Q8NGK0 314 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 OR4C15Q8NGM1 316 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 OR6N2Q8NGY6 317 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms