RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SLC35F2Q8IXU6 374 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ZDHHC23Q8IYP9 409 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ZDHHC22Q8N966 263 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 FAM81AQ8TBF8 368 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 HIST1H2AAQ96QV6 131 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 PKP2Q99959 881 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 GABARAPL3Q9BY60 117 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 ESM1Q9NQ30 184 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 CLN6Q9NWW5 311 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 KAAG1Q9UBP8 84 aa13.69□□□□□ -0.22
LINC00404-201ENST00000418660 IGHV3OR15-7A0A075B7D8 119 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 ZNF816-ZNF321PA0A0X1KG74 233 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 SAC3D1A6NKF1 404 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 SRRM5B3KS81 715 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 ZNF670-ZNF695F2Z2N8 137 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 IGLV3-1P01715 115 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 LIPFP07098 398 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 POLR2IP36954 125 aaKnown RBP13.68□□□□□ -0.22
LINC00404-201ENST00000418660 CXCR4P61073 352 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 POU4F2Q12837 409 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 C11orf91Q3C1V1 193 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 FAM76BQ5HYJ3 339 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 DOK3Q7L591 496 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 BCL6BQ8N143 479 aaPredicted RBP13.68□□□□□ -0.22
LINC00404-201ENST00000418660 SIGLECL1Q8N7X8 197 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 OR10Z1Q8NGY1 313 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 PYDC1Q8WXC3 89 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 RNF170Q96K19 258 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 APOL4Q9BPW4 351 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 RBM4BQ9BQ04 359 aaKnown RBP13.68□□□□□ -0.22
LINC00404-201ENST00000418660 TTTY10Q9BZA0 68 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 MS4A7Q9GZW8 240 aaPredicted RBP13.68□□□□□ -0.22
LINC00404-201ENST00000418660 RASSF4Q9H2L5 321 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 RIBC2Q9H4K1 309 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 SMURF1Q9HCE7 757 aa13.68□□□□□ -0.22
LINC00404-201ENST00000418660 WARS2Q9UGM6 360 aaKnown RBP13.68□□□□□ -0.22
LINC00404-201ENST00000418660 NUFIP1Q9UHK0 495 aaKnown RBP13.68□□□□□ -0.22
LINC00404-201ENST00000418660 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.67□□□□□ -0.22
LINC00404-201ENST00000418660 TMPRSS2O15393 492 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 SRSF10O75494 262 aaKnown RBP13.67□□□□□ -0.22
LINC00404-201ENST00000418660 PLATP00750 562 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 IGHV4-38-2P0DP08 117 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 FGF12P61328 243 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 EGR3Q06889 387 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 ZBTB37Q5TC79 503 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 C9orf139Q6ZV77 190 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 KCTD8Q6ZWB6 473 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 COMMD2Q86X83 199 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 OR51G2Q8NGK0 314 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 OR51E1Q8TCB6 317 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 HPSE2Q8WWQ2 592 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 RPL3LQ92901 407 aaKnown RBP13.67□□□□□ -0.22
LINC00404-201ENST00000418660 PPP1R14AQ96A00 147 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 C12orf43Q96C57 262 aaKnown RBP13.67□□□□□ -0.22
LINC00404-201ENST00000418660 FGF23Q9GZV9 251 aaPredicted RBP13.67□□□□□ -0.22
LINC00404-201ENST00000418660 GPR84Q9NQS5 396 aa13.67□□□□□ -0.22
LINC00404-201ENST00000418660 IGHV3OR16-10A0A075B7F0 116 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 LOC110117498-PIK3R3F6TDL0 507 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 DVL1O14640 695 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 ECDO95905 644 aaPredicted RBP13.66□□□□□ -0.22
LINC00404-201ENST00000418660 TTRP02766 147 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 HTR1FP30939 366 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 UBA52P62987 128 aaKnown RBP13.66□□□□□ -0.22
LINC00404-201ENST00000418660 ACTG1P63261 375 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 MFGE8Q08431 387 aaPredicted RBP13.66□□□□□ -0.22
LINC00404-201ENST00000418660 RIPPLY1Q0D2K3 151 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 KPNB1Q14974 876 aaKnown RBP13.66□□□□□ -0.22
LINC00404-201ENST00000418660 CEACAM21Q3KPI0 293 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 WDR38Q5JTN6 314 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 C12orf54Q6X4T0 127 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 SLC36A1Q7Z2H8 476 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 THAP5Q7Z6K1 395 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 PNLDC1Q8NA58 520 aaKnown RBP13.66□□□□□ -0.22
LINC00404-201ENST00000418660 SCCPDHQ8NBX0 429 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 OR8J1Q8NGP2 316 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 FAM71F1Q96KD3 344 aaPredicted RBP13.66□□□□□ -0.22
LINC00404-201ENST00000418660 ZNF48Q96MX3 618 aaPredicted RBP13.66□□□□□ -0.22
LINC00404-201ENST00000418660 CCL13Q99616 98 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 MOB1AQ9H8S9 216 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 R4GMQ9 66 aa13.66□□□□□ -0.22
LINC00404-201ENST00000418660 TRAV40A0A0B4J280 105 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 TMEM89A2RUT3 159 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 ZNF879B4DU55 563 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 H3BNX3 289 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 MAGEB4O15481 346 aaPredicted RBP13.65□□□□□ -0.22
LINC00404-201ENST00000418660 MTRF1O75570 445 aaKnown RBP13.65□□□□□ -0.22
LINC00404-201ENST00000418660 FCN3O75636 299 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 MTNR1AP48039 350 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 GNG3P63215 75 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 TMED1Q13445 227 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 ATPAF1Q5TC12 328 aaPredicted RBP13.65□□□□□ -0.22
LINC00404-201ENST00000418660 ZFP1Q6P2D0 407 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 BTN2A1Q7KYR7 527 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 ELMOD2Q8IZ81 293 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 OR5A2Q8NGI9 324 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 GCDHQ92947 438 aaPredicted RBP13.65□□□□□ -0.22
LINC00404-201ENST00000418660 SEH1LQ96EE3 360 aa13.65□□□□□ -0.22
LINC00404-201ENST00000418660 MRM2Q9UI43 246 aaKnown RBP13.65□□□□□ -0.22
LINC00404-201ENST00000418660 OR52A1Q9UKL2 312 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms