RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 FAM57BQ71RH2 274 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 BAP18Q8IXM2 172 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 ZNF101Q8IZC7 436 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 THAP6Q8TBB0 222 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 NPRL2Q8WTW4 380 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 PROK2Q9HC23 129 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 PISDQ9UG56 409 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 CA14Q9ULX7 337 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 MTCH2Q9Y6C9 303 aa8.66□□□□□ -1.02
SS18-203ENST00000415083 OR5H15A6NDH6 313 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 DHRS7CA6NNS2 312 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 QDPRP09417 244 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 MUC1P15941 1255 aaPredicted RBP8.65□□□□□ -1.02
SS18-203ENST00000415083 DHPSP49366 369 aaPredicted RBP8.65□□□□□ -1.02
SS18-203ENST00000415083 PRSS12P56730 875 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 HNRNPKP61978 463 aaKnown RBP eCLIP8.65□□□□□ -1.02
SS18-203ENST00000415083 DHRS7BQ6IAN0 325 aaPredicted RBP8.65□□□□□ -1.02
SS18-203ENST00000415083 UQCC3Q6UW78 93 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 MISPQ8IVT2 679 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 SHDQ96IW2 340 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 SPSB2Q99619 263 aa8.65□□□□□ -1.02
SS18-203ENST00000415083 CMSS1Q9BQ75 279 aaKnown RBP8.65□□□□□ -1.02
SS18-203ENST00000415083 DBHP09172 617 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 GLB1P16278 677 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 ZNF708P17019 499 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 KCNJ3P48549 501 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 GFOD2Q3B7J2 385 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 NKAPLQ5M9Q1 402 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 ADAMTS17Q8TE56 1095 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 RHBDD1Q8TEB9 315 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 AQP10Q96PS8 301 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.03
SS18-203ENST00000415083 WIF1Q9Y5W5 379 aa8.65□□□□□ -1.03
SS18-203ENST00000415083 A0A1W2PQM1 296 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 VSTM2BA6NLU5 285 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 FIGNL2A6NMB9 653 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 F8W036 122 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 MASP2O00187 686 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 HKR1P10072 659 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 SUMO3P55854 103 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 GABREP78334 506 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 BLOC1S1P78537 153 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 FLI1Q01543 452 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 NAAAQ02083 359 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 RPL7L1Q6DKI1 246 aaKnown RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 PRSS54Q6PEW0 395 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 PLXDC1Q8IUK5 500 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 FADS6Q8N9I5 356 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 DMBX1Q8NFW5 382 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 ST6GALNAC5Q9BVH7 336 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 TMEM59Q9BXS4 323 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 PECRQ9BY49 303 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 CHCHD2Q9Y6H1 151 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 IGKV1-27A0A075B6S5 117 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 CRTAPO75718 401 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 CSTBP04080 98 aaKnown RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 GLAP06280 429 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 TBPP20226 339 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 PVALBP20472 110 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 H3F3AP84243 136 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 ZNF239Q16600 458 aaKnown RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 WDR74Q6RFH5 385 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 CLEC9AQ6UXN8 241 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 Q6ZSR3 168 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 OR6X1Q8NH79 312 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 NTNG2Q96CW9 530 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 TMEM41AQ96HV5 264 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 SMIM8Q96KF7 97 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 RAB18Q9NP72 206 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.64□□□□□ -1.03
SS18-203ENST00000415083 MYOTQ9UBF9 498 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 ZDHHC8Q9ULC8 765 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 SDK2Q58EX2 2172 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 TNRC6BQ9UPQ9 1833 aaKnown RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 IGHV3-15A0A0B4J1V0 119 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 DUX1O43812 170 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 CHRM2P08172 466 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 PRF1P14222 555 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 FPR2P25090 351 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 SFTPDP35247 375 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 THBS4P35443 961 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 CLRN1P58418 232 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 SCRN3Q0VDG4 424 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 KISS1Q15726 138 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 SNAI3Q3KNW1 292 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 NKAIN1Q4KMZ8 207 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 TMEM268Q5VZI3 342 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 KLHL24Q6TFL4 600 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 GTPBP8Q8N3Z3 284 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 INO80EQ8NBZ0 244 aaPredicted RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 MRGPRX4Q96LA9 322 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 ZNF385AQ96PM9 386 aaKnown RBP8.64□□□□□ -1.03
SS18-203ENST00000415083 OR5B2Q96R09 309 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 TREM1Q9NP99 234 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 OR2S2Q9NQN1 319 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 FSCN3Q9NQT6 498 aa8.64□□□□□ -1.03
SS18-203ENST00000415083 V9GYS6 101 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms