RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 RAD51DO75771 328 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
LRCH3-202ENST00000414675 PTGFRP43088 359 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 SRSF6Q13247 344 aaKnown RBP13.41□□□□□ -0.26
LRCH3-202ENST00000414675 TUSC5Q8IXB3 177 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 OR10K1Q8NGX5 313 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 FNDC9Q8TBE3 224 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 PP6455Q8WZ26 134 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
LRCH3-202ENST00000414675 FAM117AQ9C073 453 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 GPR173Q9NS66 373 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 LIPGQ9Y5X9 500 aa13.41□□□□□ -0.26
LRCH3-202ENST00000414675 SIX6O95475 246 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 LCATP04180 440 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 GIPP09681 153 aaPredicted RBP13.4□□□□□ -0.26
LRCH3-202ENST00000414675 NAT2P11245 290 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 FCGR2AP12318 317 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 GSK3AP49840 483 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 NUBP1P53384 320 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 FOXG1P55316 489 aaPredicted RBP13.4□□□□□ -0.26
LRCH3-202ENST00000414675 SCGB2B2Q4G0G5 96 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 ESCO2Q56NI9 601 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 MRGPRFQ96AM1 343 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 REEP6Q96HR9 211 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 TIMM10BQ9Y5J6 103 aa13.4□□□□□ -0.26
LRCH3-202ENST00000414675 TMEM82A0PJX8 343 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 LEUTXA8MZ59 168 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 MRPL33O75394 65 aaKnown RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 SCGNO76038 276 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 CHRM2P08172 466 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 MMP7P09237 267 aaPredicted RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 FTH1P19P0C7X4 201 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 TCF15Q12870 199 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 ATPAF1Q5TC12 328 aaPredicted RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 C9orf135Q5VTT2 229 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 TNFAIP8L1Q8WVP5 186 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 RAB3CQ96E17 227 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 ARHGAP5-AS1Q96IT6 56 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 CALHM2Q9HA72 323 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 M0R233 179 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 MTRF1O75570 445 aaKnown RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 HIST1H1DP16402 221 aaKnown RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 C4BPBP20851 252 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 P2RX3P56373 397 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 RAP2BP61225 183 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 PPIAP62937 165 aaKnown RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 EXOSC2Q13868 293 aaKnown RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 RNASE10Q5GAN6 216 aaKnown RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 C17orf107Q6ZR85 190 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 TMED4Q7Z7H5 227 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 VASH2Q86V25 355 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 SEMA6DQ8NFY4 1073 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 KLF13Q9Y2Y9 288 aaPredicted RBP13.39□□□□□ -0.27
LRCH3-202ENST00000414675 DMXL1Q9Y485 3027 aa13.39□□□□□ -0.27
LRCH3-202ENST00000414675 ZNHIT1O43257 154 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 OR2A4O95047 310 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 UBBP0CG47 229 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 HRH1P35367 487 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 ALDH3B1P43353 468 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 H2BFSP57053 126 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 RPS27AP62979 156 aaKnown RBP13.38□□□□□ -0.27
LRCH3-202ENST00000414675 ARF1P84077 181 aaKnown RBP13.38□□□□□ -0.27
LRCH3-202ENST00000414675 C4orf46Q504U0 113 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 PNLDC1Q8NA58 520 aaKnown RBP13.38□□□□□ -0.27
LRCH3-202ENST00000414675 UXS1Q8NBZ7 420 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 CPEB3Q8NE35 698 aaKnown RBP13.38□□□□□ -0.27
LRCH3-202ENST00000414675 HAS2Q92819 552 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 OR2A7Q96R45 310 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 SLC25A21Q9BQT8 299 aaPredicted RBP13.38□□□□□ -0.27
LRCH3-202ENST00000414675 VSIG4Q9Y279 399 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 LINC00862A6NCI5 91 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 FOXI3A8MTJ6 420 aaPredicted RBP13.38□□□□□ -0.27
LRCH3-202ENST00000414675 MFNGO00587 321 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 SYNGR4O95473 234 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 MPC2O95563 127 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 SERPINA2P20848 420 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 CXADRP78310 365 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 GRK1Q15835 563 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 PABPC1L2AQ5JQF8 200 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 DCAF12L2Q5VW00 463 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 FAM89BQ8N5H3 189 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 PRSS33Q8NF86 280 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 OR2AK2Q8NG84 335 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 C10orf35Q96D05 121 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 ALX4Q9H161 411 aaPredicted RBP13.38□□□□□ -0.27
LRCH3-202ENST00000414675 IFT46Q9NQC8 304 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 CSAG2Q9Y5P2 127 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 LOC400499M0QZD8 3231 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 ARHGAP21Q5T5U3 1957 aa13.38□□□□□ -0.27
LRCH3-202ENST00000414675 LOC100509620A0A075B734 347 aa13.37□□□□□ -0.27
LRCH3-202ENST00000414675 CDRT15L2A8MXV6 281 aa13.37□□□□□ -0.27
LRCH3-202ENST00000414675 DISC1C4P0D8 188 aa13.37□□□□□ -0.27
LRCH3-202ENST00000414675 GSTP1P09211 210 aaKnown RBP13.37□□□□□ -0.27
LRCH3-202ENST00000414675 OR4E1P0C645 316 aa13.37□□□□□ -0.27
LRCH3-202ENST00000414675 LIPCP11150 499 aa13.37□□□□□ -0.27
LRCH3-202ENST00000414675 MGMTP16455 207 aa13.37□□□□□ -0.27
LRCH3-202ENST00000414675 RAB14P61106 215 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms