RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 GPR31O00270 319 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 BLVRBP30043 206 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 ECH1Q13011 328 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 ZNF385CQ66K41 422 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 CRIP3Q6Q6R5 217 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 LHFPL1Q86WI0 220 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 SLC25A43Q8WUT9 341 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 SCGB3A2Q96PL1 93 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 SLC6A15Q9H2J7 730 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 METTL8Q9H825 291 aaKnown RBP13.17□□□□□ -0.3
TTC39A-208ENST00000413473 ZNF160Q9HCG1 818 aa13.17□□□□□ -0.3
TTC39A-208ENST00000413473 ACTL6AO96019 429 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 CD79AP11912 226 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 PRF1P14222 555 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 CBX5P45973 191 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 SLC6A9P48067 706 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 CCL7P80098 99 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 NAAAQ02083 359 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 DTX1Q86Y01 620 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 RNF141Q8WVD5 230 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 WNT2BQ93097 391 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 PCDHB16Q9NRJ7 776 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 EHFQ9NZC4 300 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 OSGIN2Q9Y236 505 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 ABCD4O14678 606 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 DKK1O94907 266 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 SERPINA2P20848 420 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 EIF1P41567 113 aaKnown RBP13.16□□□□□ -0.3
TTC39A-208ENST00000413473 GUCA1AP43080 201 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-208ENST00000413473 SLC35A1P78382 337 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 PRSS54Q6PEW0 395 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 FADS6Q8N9I5 356 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 TMEM100Q9NV29 134 aa13.16□□□□□ -0.3
TTC39A-208ENST00000413473 IGHV5-10-1A0A0J9YXX1 117 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 OR5H15A6NDH6 313 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 SRSF3P84103 164 aaKnown RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 UBE2V2Q15819 145 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 ZNF239Q16600 458 aaKnown RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 PABPC1L2AQ5JQF8 200 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 ZNF585AQ6P3V2 769 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 Q7L0L9 218 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 PUSL1Q8N0Z8 303 aaKnown RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 GSKIPQ9P0R6 139 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 CHCHD2Q9Y6H1 151 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 LOC102725191A0A1B0GVB3 256 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 HOXB5P09067 269 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 FAM157CP0CG43 387 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 NAT2P11245 290 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 FAHP16930 419 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 ADCYAP1P18509 176 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 CTSSP25774 331 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 LSM6P62312 80 aaKnown RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 RAB32Q13637 225 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 GUCA2BQ16661 112 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 RSPO4Q2I0M5 234 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 PLEKHN1Q494U1 663 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 TMEM200AQ86VY9 491 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 LRRC18Q8N456 261 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 OR51F2Q8NH61 342 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 SLC26A1Q9H2B4 701 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 ELL3Q9HB65 397 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 OR2S2Q9NQN1 319 aa13.15□□□□□ -0.3
TTC39A-208ENST00000413473 C19orf25Q9UFG5 118 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-208ENST00000413473 IGHV3-15A0A0B4J1V0 119 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 FOXI3A8MTJ6 420 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-208ENST00000413473 HPNP05981 417 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 FCGR2AP12318 317 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 RPS2P15880 293 aaKnown RBP13.14□□□□□ -0.31
TTC39A-208ENST00000413473 MSR1P21757 451 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 ADH6P28332 368 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 CCDC157Q569K6 752 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 DRAM2Q6UX65 266 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 GJC3Q8NFK1 279 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 PECRQ9BY49 303 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 PURGQ9UJV8 347 aaKnown RBP13.14□□□□□ -0.31
TTC39A-208ENST00000413473 KNG1P01042 644 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 CELA2AP08217 269 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 TAS2R46P59540 309 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 RSPO1Q2MKA7 263 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-208ENST00000413473 TMEM88Q6PEY1 159 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 PPP1R3BQ86XI6 285 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 SPEM1Q8N4L4 309 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 ARL11Q969Q4 196 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 C2orf50Q96LR7 162 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
TTC39A-208ENST00000413473 S100A13Q99584 98 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 ADAT1Q9BUB4 502 aaKnown RBP13.14□□□□□ -0.31
TTC39A-208ENST00000413473 GHRLQ9UBU3 117 aa13.14□□□□□ -0.31
TTC39A-208ENST00000413473 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 LYL1P12980 280 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 IL32P24001 234 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 ALDH3B1P43353 468 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 H3F3AP84243 136 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 ENDOGQ14249 297 aaKnown RBP13.13□□□□□ -0.31
TTC39A-208ENST00000413473 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 GALNTL5Q7Z4T8 443 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 SVBPQ8N300 66 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms