RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 SLC25A43Q8WUT9 341 aaPredicted RBP12.16□□□□□ -0.46
NUB1-201ENST00000413040 C1orf147Q96MC9 270 aaPredicted RBP12.16□□□□□ -0.46
NUB1-201ENST00000413040 DOCK7Q96N67 2140 aa12.16□□□□□ -0.46
NUB1-201ENST00000413040 TSNAXQ99598 290 aaKnown RBP12.16□□□□□ -0.46
NUB1-201ENST00000413040 HDHD3Q9BSH5 251 aaPredicted RBP12.16□□□□□ -0.46
NUB1-201ENST00000413040 PNRC2Q9NPJ4 139 aaKnown RBP12.16□□□□□ -0.46
NUB1-201ENST00000413040 PLEKHJ1Q9NW61 149 aa12.16□□□□□ -0.46
NUB1-201ENST00000413040 SIT1Q9Y3P8 196 aa12.16□□□□□ -0.46
NUB1-201ENST00000413040 CHCHD2Q9Y6H1 151 aaPredicted RBP12.16□□□□□ -0.46
NUB1-201ENST00000413040 TNFSF11O14788 317 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 UBE2V2Q15819 145 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 GPR132Q9UNW8 380 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 MSGN1A6NI15 193 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 M0R135 149 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 TOX3O15405 576 aaPredicted RBP12.15□□□□□ -0.46
NUB1-201ENST00000413040 SERPINA5P05154 406 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 STARD6P59095 220 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 RIPPLY1Q0D2K3 151 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 ZNF345Q14585 488 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 ZNF273Q14593 569 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 BRICD5Q6PL45 260 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 OR51F2Q8NH61 342 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 LHFPL5Q8TAF8 219 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 ZNF799Q96GE5 643 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 LYZL4Q96KX0 146 aa12.15□□□□□ -0.46
NUB1-201ENST00000413040 DHHO43323 396 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 GP1BAP07359 652 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 TAF9Q16594 264 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 SLC25A53Q5H9E4 307 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 MOB3CQ70IA8 216 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 DTX1Q86Y01 620 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 C20orf196Q8IYI0 205 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 OR5AP2Q8NGF4 316 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 TMEM230Q96A57 120 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 RRNAD1Q96FB5 475 aaKnown RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 ZC3H10Q96K80 434 aaKnown RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 ADAT1Q9BUB4 502 aaKnown RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 SLC6A15Q9H2J7 730 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 HPF1Q9NWY4 346 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 OR5AC2Q9NZP5 309 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 FLVCR1Q9Y5Y0 555 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 WDFY3Q8IZQ1 3526 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 TEX13DA0A0J9YY54 714 aaPredicted RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 FAM74A7A6NL05 159 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 H0YIZ8 118 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 K7ESF4 209 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 CSTBP04080 98 aaKnown RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 TPT1P13693 172 aaKnown RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 TBPP20226 339 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 OPRM1P35372 400 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 RAB32Q13637 225 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 ANKRD55Q3KP44 614 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 FAM74A3Q4VXF1 159 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 ZNF385CQ66K41 422 aaPredicted RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 ARRDC1Q8N5I2 433 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 ZSCAN4Q8NAM6 433 aaPredicted RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 OR13G1Q8NGZ3 307 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 IFI44Q8TCB0 444 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 TOMM40LQ969M1 308 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 MARC2Q969Z3 335 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 NELFAQ9H3P2 528 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 TREM1Q9NP99 234 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 WNT16Q9UBV4 365 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 FAM221AA4D161 298 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 PATE3B3GLJ2 98 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 MFNGO00587 321 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 SPRY1O43609 319 aaPredicted RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 MTCP1P56278 107 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 ECH1Q13011 328 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 ZNF169Q14929 603 aaPredicted RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 OPN5Q6U736 354 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 CCDC36Q8IYA8 594 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 CPNE2Q96FN4 548 aaPredicted RBP12.14□□□□□ -0.47
NUB1-201ENST00000413040 OR10C1Q96KK4 312 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 LDAHQ9H6V9 325 aa12.14□□□□□ -0.47
NUB1-201ENST00000413040 NCOR1O75376 2440 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 SFT2D2O95562 160 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 LCATP04180 440 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 CYCSP99999 105 aaKnown RBP12.13□□□□□ -0.47
NUB1-201ENST00000413040 PCOLCEQ15113 449 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 PDCD1Q15116 288 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 FAHD2BQ6P2I3 314 aaPredicted RBP12.13□□□□□ -0.47
NUB1-201ENST00000413040 BAP18Q8IXM2 172 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 FAHD2AQ96GK7 314 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
NUB1-201ENST00000413040 HRH4Q9H3N8 390 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 COL5A1P20908 1838 aaPredicted RBP12.13□□□□□ -0.47
NUB1-201ENST00000413040 C9J4A7 227 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 GPR31O00270 319 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 AGPAT2O15120 278 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 ZNHIT1O43257 154 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 TRAPPC6AO75865 159 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 HPNP05981 417 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 GSK3AP49840 483 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 DRAM2Q6UX65 266 aa12.13□□□□□ -0.47
NUB1-201ENST00000413040 RPS19BP1Q86WX3 136 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms