RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 LYZL4Q96KX0 146 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 C1orf147Q96MC9 270 aaPredicted RBP11.88□□□□□ -0.51
LIMS1-205ENST00000410093 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 TTTY12Q9BZ98 90 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 BCO1Q9HAY6 547 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 ZNF224Q9NZL3 707 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 NOSIPQ9Y314 301 aaKnown RBP11.88□□□□□ -0.51
LIMS1-205ENST00000410093 APC2O95996 2303 aa11.88□□□□□ -0.51
LIMS1-205ENST00000410093 CFAP47Q6ZTR5 3102 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 PINLYPA6NC86 204 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 SERPINE3A8MV23 424 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 MASP2O00187 686 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 SP1P08047 785 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 ZNF735P0CB33 412 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 HIST1H1DP16402 221 aaKnown RBP11.87□□□□□ -0.51
LIMS1-205ENST00000410093 CPT2P23786 658 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 CLDN18P56856 261 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 UBE2MP61081 183 aaKnown RBP11.87□□□□□ -0.51
LIMS1-205ENST00000410093 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
LIMS1-205ENST00000410093 MOGAT2Q3SYC2 334 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 OR10K2Q6IF99 312 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 FAAP20Q6NZ36 180 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 ARRDC1Q8N5I2 433 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 UXS1Q8NBZ7 420 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 MDS2Q8NDY4 140 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 OR8S1Q8NH09 359 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 ROBO4Q8WZ75 1007 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 SGK3Q96BR1 496 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 SIGLEC12Q96PQ1 595 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 OR2H1Q9GZK4 316 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 CLEC4MQ9H2X3 399 aaPredicted RBP11.87□□□□□ -0.51
LIMS1-205ENST00000410093 PIGLQ9Y2B2 252 aa11.87□□□□□ -0.51
LIMS1-205ENST00000410093 IGKV1-9A0A0C4DH69 117 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 HMSDA8MTL9 139 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 MPIG6BO95866 241 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 IFNA6P05013 189 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 STARP49675 285 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 TAS2R31P59538 309 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 PLGLB1Q02325 96 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 CEACAM16Q2WEN9 425 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 GFOD2Q3B7J2 385 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 VAX1Q5SQQ9 334 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 IGF2-ASQ6U949 168 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 LHFPL2Q6ZUX7 228 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.86□□□□□ -0.51
LIMS1-205ENST00000410093 OR2AK2Q8NG84 335 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 OR4D10Q8NGI6 311 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 TNFAIP8L1Q8WVP5 186 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 MRPS24Q96EL2 167 aaKnown RBP11.86□□□□□ -0.51
LIMS1-205ENST00000410093 SELENOIQ9C0D9 397 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 PRDM14Q9GZV8 571 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 BEX1Q9HBH7 125 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 RALYQ9UKM9 306 aaKnown RBP11.86□□□□□ -0.51
LIMS1-205ENST00000410093 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 ANKRD11Q6UB99 2663 aaPredicted RBP11.86□□□□□ -0.51
LIMS1-205ENST00000410093 OR14I1A6ND48 311 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 ZNF587BE7ETH6 402 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 CRTAPO75718 401 aaPredicted RBP11.86□□□□□ -0.51
LIMS1-205ENST00000410093 OR4E1P0C645 316 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 VSIG10L2P0DP72 767 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 ZNF32P17041 273 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 OR3A4PP47883 348 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 UCNP55089 124 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 C4orf46Q504U0 113 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 Q5BKY6 102 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 NSUN5P2Q63ZY6 315 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 TMEM17Q86X19 198 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 DTX1Q86Y01 620 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 GALNT16Q8N428 558 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 ZFP62Q8NB50 900 aaPredicted RBP11.86□□□□□ -0.51
LIMS1-205ENST00000410093 TMEM178AQ8NBL3 297 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 REEP6Q96HR9 211 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 POFUT1Q9H488 388 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 OPA3Q9H6K4 179 aa11.86□□□□□ -0.51
LIMS1-205ENST00000410093 ZZEF1O43149 2961 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 MEIS3P1A6NDR6 274 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 SMLR1H3BR10 107 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 MFNGO00587 321 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 KLK10O43240 276 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 IFNA7P01567 189 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 FCER2P06734 321 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 HLA-GP17693 338 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 ECI1P42126 302 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 HTR5AP47898 357 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 TAS2R46P59540 309 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 CXADRP78310 365 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 PSG4Q00888 419 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 FGL1Q08830 312 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 SLC10A1Q14973 349 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 UBE2V2Q15819 145 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 TMEM42Q69YG0 159 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 LIN54Q6MZP7 749 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 GALNTL5Q7Z4T8 443 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 SLC25A42Q86VD7 318 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 SPACA3Q8IXA5 215 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 C12orf45Q8N5I9 185 aaPredicted RBP11.85□□□□□ -0.51
LIMS1-205ENST00000410093 TMEM251Q8N6I4 163 aa11.85□□□□□ -0.51
LIMS1-205ENST00000410093 DVL3Q92997 716 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms