RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CD74P04233 296 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 NAT2P11245 290 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 CD79AP11912 226 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 ALDH3B1P43353 468 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 MTCP1P56278 107 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 GNG2P59768 71 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 ZNF92Q03936 586 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 CNN3Q15417 329 aaKnown RBP18.01■□□□□ 0.47
USP39-203ENST00000409470 IGFL2Q6UWQ7 119 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 NCCRP1Q6ZVX7 275 aaPredicted RBP18.01■□□□□ 0.47
USP39-203ENST00000409470 RTN4RL2Q86UN3 420 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 GVQW1Q8N7I0 195 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 OR10K1Q8NGX5 313 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 SPSB1Q96BD6 273 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 TRAF4Q9BUZ4 470 aaPredicted RBP18.01■□□□□ 0.47
USP39-203ENST00000409470 NPDC1Q9NQX5 325 aaPredicted RBP18.01■□□□□ 0.47
USP39-203ENST00000409470 ATPIF1Q9UII2 106 aa18.01■□□□□ 0.47
USP39-203ENST00000409470 MEIKINA0A087WXM9 373 aa18■□□□□ 0.47
USP39-203ENST00000409470 ZNF891A8MT65 544 aaPredicted RBP18■□□□□ 0.47
USP39-203ENST00000409470 XRCC2O43543 280 aa18■□□□□ 0.47
USP39-203ENST00000409470 SERPINA2P20848 420 aa18■□□□□ 0.47
USP39-203ENST00000409470 CCNOP22674 350 aa18■□□□□ 0.47
USP39-203ENST00000409470 CLN3Q13286 438 aa18■□□□□ 0.47
USP39-203ENST00000409470 IDO2Q6ZQW0 420 aa18■□□□□ 0.47
USP39-203ENST00000409470 BPIFB2Q8N4F0 458 aa18■□□□□ 0.47
USP39-203ENST00000409470 ZFAND1Q8TCF1 268 aa18■□□□□ 0.47
USP39-203ENST00000409470 B3GNT2Q9NY97 397 aa18■□□□□ 0.47
USP39-203ENST00000409470 PRSS50Q9UI38 385 aa18■□□□□ 0.47
USP39-203ENST00000409470 SCP2D1Q9UJQ7 156 aa18■□□□□ 0.47
USP39-203ENST00000409470 DMXL1Q9Y485 3027 aa18■□□□□ 0.47
USP39-203ENST00000409470 FAM230AA0A1W2PPH8 454 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 CSN2P05814 226 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 GSTP1P09211 210 aaKnown RBP17.99■□□□□ 0.47
USP39-203ENST00000409470 HIST1H1DP16402 221 aaKnown RBP17.99■□□□□ 0.47
USP39-203ENST00000409470 AGTR1P30556 359 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 RPS27AP62979 156 aaKnown RBP17.99■□□□□ 0.47
USP39-203ENST00000409470 FAM3AP98173 230 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 TNK1Q13470 666 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 MEF2DQ14814 521 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 PLAC9Q5JTB6 97 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 CLVS2Q5SYC1 327 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 P4HA3Q7Z4N8 544 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 CPNE2Q96FN4 548 aaPredicted RBP17.99■□□□□ 0.47
USP39-203ENST00000409470 HYLS1Q96M11 299 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 TMEM246Q9BRR3 403 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 C1QTNF5Q9BXJ0 243 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 PRDM14Q9GZV8 571 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 DLL3Q9NYJ7 618 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 MYO7BQ6PIF6 2116 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 TRAV17A0A0B4J275 112 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 hCG_38984A0A1B0GV85 526 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 SNRPGP15A8MWD9 76 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 DISC1C4P0D8 188 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 TM4SF5O14894 197 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 VSIG10L2P0DP72 767 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 EDN3P14138 238 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 MGMTP16455 207 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 PRKACBP22694 351 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 ZP1P60852 638 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 RNASE10Q5GAN6 216 aaKnown RBP17.99■□□□□ 0.47
USP39-203ENST00000409470 ZNF626Q68DY1 528 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 KCNK7Q9Y2U2 307 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 ZNF175Q9Y473 711 aa17.99■□□□□ 0.47
USP39-203ENST00000409470 NRASP01111 189 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 TMEM225BP0DP42 221 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 TMEM50BP56557 158 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 NKPD1Q17RQ9 610 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 SCGB2B2Q4G0G5 96 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 OR52W1Q6IF63 320 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 SLC36A1Q7Z2H8 476 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 CD163Q86VB7 1156 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 STEAP2Q8NFT2 490 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 OR52B4Q8NGK2 314 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 ARHGAP5-AS1Q96IT6 56 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 SLC25A21Q9BQT8 299 aaPredicted RBP17.98■□□□□ 0.47
USP39-203ENST00000409470 LRFN3Q9BTN0 628 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 ZNF436Q9C0F3 470 aaPredicted RBP17.98■□□□□ 0.47
USP39-203ENST00000409470 RANBP3Q9H6Z4 567 aaPredicted RBP17.98■□□□□ 0.47
USP39-203ENST00000409470 ZNF292O60281 2723 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 LOC100509620A0A075B734 347 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 C5orf49A4QMS7 147 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 SSX5O60225 188 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 ZNF735P0CB33 412 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 ARR3P36575 388 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 TMEM53Q6P2H8 277 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 BORCS8Q96FH0 119 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 SLC6A7Q99884 636 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 MGAT4CQ9UBM8 478 aa17.98■□□□□ 0.47
USP39-203ENST00000409470 RIF1Q5UIP0 2472 aaKnown RBP17.97■□□□□ 0.47
USP39-203ENST00000409470 UBE2QL1A1L167 161 aa17.97■□□□□ 0.47
USP39-203ENST00000409470 ZNF503-AS2A6NEH8 195 aa17.97■□□□□ 0.47
USP39-203ENST00000409470 RAB1AP62820 205 aa17.97■□□□□ 0.47
USP39-203ENST00000409470 FAM89BQ8N5H3 189 aa17.97■□□□□ 0.47
USP39-203ENST00000409470 PLEKHA6Q9Y2H5 1048 aa17.97■□□□□ 0.47
USP39-203ENST00000409470 URB1O60287 2271 aaKnown RBP17.97■□□□□ 0.47
USP39-203ENST00000409470 ZFHX2Q9C0A1 2572 aaPredicted RBP17.97■□□□□ 0.47
USP39-203ENST00000409470 RGS13O14921 159 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 IGHG3P01860 377 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 COX5BP10606 129 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 CCL2P13500 99 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms