RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 PSMB1P20618 241 aaKnown RBP12.11□□□□□ -0.47
GPNMB-203ENST00000409458 MNDAP41218 407 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 MMP15P51511 669 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
GPNMB-203ENST00000409458 PLCXD3Q63HM9 321 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 PCSK4Q6UW60 755 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 MOB3CQ70IA8 216 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 MRGPRGQ86SM5 289 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 SETD6Q8TBK2 473 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 FAM46BQ96A09 425 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 PTX4Q96A99 478 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 CCDC120Q96HB5 630 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 DMRTA2Q96SC8 542 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 THAP7Q9BT49 309 aaPredicted RBP12.11□□□□□ -0.47
GPNMB-203ENST00000409458 ATG5Q9H1Y0 275 aa12.11□□□□□ -0.47
GPNMB-203ENST00000409458 EIF3KQ9UBQ5 218 aaKnown RBP12.11□□□□□ -0.47
GPNMB-203ENST00000409458 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
GPNMB-203ENST00000409458 hCG_2014768A0A024R1R8 64 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 IGKV1-27A0A075B6S5 117 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 TRGV8A0A0C4DH27 118 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 FAM230AA0A1W2PPH8 454 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 ZNF850A8MQ14 1090 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 TMEM14DPA8MWL7 114 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 J3QW42 95 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 XRCC3O43542 346 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PTTG1O95997 202 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 SFTPCP11686 197 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PTHLHP12272 177 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 SPNP16150 400 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PRKACBP22694 351 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 CCKARP32238 428 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 FAM27E3Q08E93 113 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 ASAH1Q13510 395 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 TIMM23BQ5SRD1 257 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 MTFR2Q6P444 385 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 MYO7BQ6PIF6 2116 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 C1QL2Q7Z5L3 287 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PNLDC1Q8NA58 520 aaKnown RBP12.1□□□□□ -0.47
GPNMB-203ENST00000409458 MINDY2Q8NBR6 621 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 OR5L1Q8NGL2 311 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 TNFAIP8L1Q8WVP5 186 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 YIPF5Q969M3 257 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 WBP1Q96G27 269 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
GPNMB-203ENST00000409458 RABL2AQ9UBK7 228 aaPredicted RBP12.1□□□□□ -0.47
GPNMB-203ENST00000409458 RABL2BQ9UNT1 228 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 CD300LBA8K4G0 201 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PLA2G10O15496 165 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
GPNMB-203ENST00000409458 CD3GP09693 182 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 ZNF35P13682 527 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PTGFRP43088 359 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 ZP1P60852 638 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PPP1CBP62140 327 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 PRDX4Q13162 271 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 LHFPL2Q6ZUX7 228 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 TMEM104Q8NE00 496 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 C19orf18Q8NEA5 215 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 SMIM4Q8WVI0 70 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 VKORC1Q9BQB6 163 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 ACTR6Q9GZN1 396 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 C11orf54Q9H0W9 315 aaPredicted RBP12.1□□□□□ -0.47
GPNMB-203ENST00000409458 FBLN5Q9UBX5 448 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 RAB22AQ9UL26 194 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 MEMO1Q9Y316 297 aa12.1□□□□□ -0.47
GPNMB-203ENST00000409458 A0A1W2PP11 408 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 LILRA1O75019 489 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 CST4P01036 141 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 NAT2P11245 290 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 RFX2P48378 723 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 MTCP1P56278 107 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 GDPD3Q7L5L3 318 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 KRT74Q7RTS7 529 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 OR2W3Q7Z3T1 314 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 FAM169BQ8N8A8 192 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 ACBD4Q8NC06 268 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 BHLHE23Q8NDY6 225 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 CSNK2A3Q8NEV1 391 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
GPNMB-203ENST00000409458 ITFG2Q969R8 447 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 BORCS8Q96FH0 119 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 COX4I2Q96KJ9 171 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 OR2J1Q9GZK6 312 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 FGF23Q9GZV9 251 aaPredicted RBP12.09□□□□□ -0.47
GPNMB-203ENST00000409458 DIABLOQ9NR28 239 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 JKAMPQ9P055 326 aa12.09□□□□□ -0.47
GPNMB-203ENST00000409458 TRAV18A0A075B6X5 111 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 IGHV2OR16-5A0A0B4J2B6 119 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 GABARAPH6UMI1 98 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 CDC14BO60729 498 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 MPIG6BO95866 241 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 UBBP0CG47 229 aa12.08□□□□□ -0.48
GPNMB-203ENST00000409458 CALCRP30988 508 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms