RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 MAB21L1Q13394 359 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 ENDOGQ14249 297 aaKnown RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 SLC16A14Q7RTX9 510 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 ELMOD2Q8IZ81 293 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 OR2AJ1Q8NGZ0 328 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 OR56B4Q8NH76 319 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 FGFBP3Q8TAT2 258 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 LINC01560Q8TB33 94 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 PPP1R14AQ96A00 147 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 FAM3DQ96BQ1 224 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 MUCL1Q96DR8 90 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 FBXO17Q96EF6 278 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 RNF170Q96K19 258 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 DMRTB1Q96MA1 342 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 GHITMQ9H3K2 345 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 HRASLSQ9HDD0 168 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 ZNF224Q9NZL3 707 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 NDRG3Q9UGV2 375 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 GDF2Q9UK05 429 aaPredicted RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 KLF2Q9Y5W3 355 aaPredicted RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 DOPEY1Q5JWR5 2465 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 A0A0A6YYH2 397 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 A0A0A6YYJ9 748 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 LOC390937A0A1W2PQ73 354 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 GGT3PA6NGU5 568 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 TUBAL3A6NHL2 446 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 A6NJ64 397 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 C19orf84I3L1E1 186 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 CTAG2O75638 210 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 CD79AP11912 226 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 ERP29P30040 261 aaKnown RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 PSMA6P60900 246 aaKnown RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 MRPS15P82914 257 aaKnown RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 SSBP1Q04837 148 aaKnown RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 C1orf100Q5SVJ3 147 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 ALKBH2Q6NS38 261 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 CORO6Q6QEF8 472 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 OR51D1Q8NGF3 324 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 SLC25A28Q96A46 364 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 FYTTD1Q96QD9 318 aaKnown RBP11.64□□□□□ -0.55
LIMS1-204ENST00000409441 C1QTNF6Q9BXI9 259 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 MED28Q9H204 178 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 OBP2BQ9NPH6 170 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 MCUBQ9NWR8 336 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 B3GNT2Q9NY97 397 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 TAS2R8Q9NYW2 309 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 POLR1DQ9Y2S0 133 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 SLC25A15Q9Y619 301 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 LHFPL6Q9Y693 200 aa11.64□□□□□ -0.55
LIMS1-204ENST00000409441 TRAV6A0A075B6T7 132 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 ZNF503-AS2A6NEH8 195 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 H3BSH0 61 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 PRAF2O60831 178 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 C1QBP02746 253 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 MT-ND4P03905 459 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 ACSM4P0C7M7 580 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 STOMP27105 288 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 HTR2CP28335 458 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 PCBD1P61457 104 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 RAB1AP62820 205 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 PPA1Q15181 289 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 C2orf76Q3KRA6 126 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 CD276Q5ZPR3 534 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 DPPA2Q7Z7J5 298 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 OR10S1Q8NGN2 331 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 CAPSLQ8WWF8 208 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 PTX4Q96A99 478 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 PHF21AQ96BD5 680 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 PBOV1Q9GZY1 135 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 ASH2LQ9UBL3 628 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 AMDHD2Q9Y303 409 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 TIMM10BQ9Y5J6 103 aa11.63□□□□□ -0.55
LIMS1-204ENST00000409441 TENM4Q6N022 2769 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 PRSS44E7EML9 344 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 H7C417 338 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 P2RY10O00398 339 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 TTRP02766 147 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 THBDP07204 575 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 MMP7P09237 267 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-204ENST00000409441 HSD11B1P28845 292 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 FAUP35544 74 aaKnown RBP11.62□□□□□ -0.55
LIMS1-204ENST00000409441 ARR3P36575 388 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 CCR6P51684 374 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 IFITM2Q01629 132 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 CDK10Q15131 360 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 GSG1Q2KHT4 349 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 CFAP77Q6ZQR2 320 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
LIMS1-204ENST00000409441 C20orf85Q9H1P6 137 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 OR51J1Q9H342 316 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 MTFP1Q9UDX5 166 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 CACNA1CQ13936 2221 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 LRRK2Q5S007 2527 aa11.62□□□□□ -0.55
LIMS1-204ENST00000409441 TMEM272A0A1B0GTI8 110 aa11.61□□□□□ -0.55
LIMS1-204ENST00000409441 A1L4Q6 167 aa11.61□□□□□ -0.55
LIMS1-204ENST00000409441 SULT1C2O00338 296 aa11.61□□□□□ -0.55
LIMS1-204ENST00000409441 RER1O15258 196 aa11.61□□□□□ -0.55
LIMS1-204ENST00000409441 PEX14O75381 377 aa11.61□□□□□ -0.55
LIMS1-204ENST00000409441 RBBP9O75884 186 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms