RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CDH20Q9HBT6 801 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 IL36AQ9UHA7 158 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 CDRT15L2A8MXV6 281 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 H0Y8X5 98 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 SPINT1O43278 529 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 MTX2O75431 263 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 MAS1P04201 325 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 CXCL1P09341 107 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 CEACAM1P13688 526 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 ST6GAL1P15907 406 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF28P17035 718 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 IGFBP3P17936 291 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 RPL12P30050 165 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 CCKARP32238 428 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 CCR5P51681 352 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 PRDX4Q13162 271 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 C1orf194Q5T5A4 169 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 GPR157Q5UAW9 335 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 SP5Q6BEB4 398 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 TMEM220Q6QAJ8 160 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 PARS2Q7L3T8 475 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 OR51A7Q8NH64 312 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 CD300LFQ8TDQ1 290 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 BSCL2Q96G97 398 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 C4orf45Q96LM5 186 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 SUCNR1Q9BXA5 334 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 ANGPTL4Q9BY76 406 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 TRIM2Q9C040 744 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 NELFAQ9H3P2 528 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 TUBD1Q9UJT1 453 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 RAB22AQ9UL26 194 aa9.45□□□□□ -0.9
NIF3L1-204ENST00000409357 TRAV27A0A087WT01 109 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 KIR2DL5BA0A0G2JN68 375 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 KIR2DL5BA0A0G2JPC4 375 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 A0A1W2PR77 199 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 PRR32B1ATL7 298 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 H3BQ15 152 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 TSPAN2O60636 221 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 LDB3O75112 727 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 HSPB1P04792 205 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 AK4P27144 223 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 P2RY1P47900 373 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 SOX2P48431 317 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 HMGN2P46Q86SG4 172 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 LYPD6Q86Y78 171 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 KIR2DL5AQ8N109 375 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 ZNF676Q8N7Q3 588 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 ADAD2Q8NCV1 583 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 PLPP5Q8NEB5 264 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 OR51A2Q8NGJ7 313 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 OR2L8Q8NGY9 312 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 OR14K1Q8NGZ2 314 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 OR4K13Q8NH42 304 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 OR5K2Q8NHB8 316 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 TAAR8Q969N4 342 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 ACY3Q96HD9 319 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 C20orf24Q9BUV8 137 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 ALG12Q9BV10 488 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 NUDT9Q9BW91 350 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 OR2AG1Q9H205 316 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 Q9N2J8 555 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 TM7SF3Q9NS93 570 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 MYOTQ9UBF9 498 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 LOC400499M0QZD8 3231 aa9.44□□□□□ -0.9
NIF3L1-204ENST00000409357 PTPRBP23467 1997 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 APC2O95996 2303 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 A0A1W2PQU0 124 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 A0A1W2PR48 441 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 FTCDNL1E5RQL4 147 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 K7EPK0 472 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 NSA2O95478 260 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 CER1O95813 267 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 TXNDC12O95881 172 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 TRGC2P03986 189 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 PRNPP04156 253 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 FPR2P25090 351 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 CD38P28907 300 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 TAGLN2P37802 199 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 SSR2P43308 183 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 MMP16P51512 607 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 SOX8P57073 446 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 PRPS1P60891 318 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 GABREP78334 506 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 FOXC1Q12948 553 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 RAB32Q13637 225 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 EBPQ15125 230 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 SHBQ15464 509 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 IQCJQ1A5X6 159 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 GFI1BQ5VTD9 330 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 ERN2Q76MJ5 926 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 SLC16A14Q7RTX9 510 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 HSD11B1LQ7Z5J1 315 aa9.43□□□□□ -0.9
NIF3L1-204ENST00000409357 AMZ2Q86W34 360 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms