RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 GVQW1Q8N7I0 195 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 ZNF321PQ8N8H1 164 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 Q9N2K0 584 aa15.87■□□□□ 0.13
SMPD4-202ENST00000409031 ZNF92Q03936 586 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 AAED1Q7RTV5 226 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 CATSPERDQ86XM0 798 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 OR2AE1Q8NHA4 323 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 RPS4Y2Q8TD47 263 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 REEP6Q96HR9 211 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 TCN2P20062 427 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 FKBP2P26885 142 aaKnown RBP15.86■□□□□ 0.13
SMPD4-202ENST00000409031 CDKN2AP42771 156 aaKnown RBP15.86■□□□□ 0.13
SMPD4-202ENST00000409031 DLK1P80370 383 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 TMEM164Q5U3C3 297 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 OR5C1Q8NGR4 320 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 OR51F2Q8NH61 342 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 ARHGAP5-AS1Q96IT6 56 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 ST6GALNAC2Q9UJ37 374 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 NRAPQ86VF7 1730 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 PHIPQ8WWQ0 1821 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 A0A0B4J293 547 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 DDTP30046 118 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 CA13Q8N1Q1 262 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 PP6455Q8WZ26 134 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 OR51B4Q9Y5P0 310 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 H3BQ15 152 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 NRSN2Q9GZP1 204 aa15.86■□□□□ 0.13
SMPD4-202ENST00000409031 LSM11P83369 360 aaKnown RBP eCLIP15.85■□□□□ 0.136e-6■□□□□ 10.9
SMPD4-202ENST00000409031 HABP2Q14520 560 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-202ENST00000409031 MBNL1Q9NR56 388 aaKnown RBP15.85■□□□□ 0.13
SMPD4-202ENST00000409031 BET1LQ9NYM9 111 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 SDK1Q7Z5N4 2213 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 MLF1P58340 268 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 NKAIN2Q5VXU1 208 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 AMER3Q8N944 861 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 TREM2Q9NZC2 230 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 METTL1Q9UBP6 276 aaKnown RBP15.85■□□□□ 0.13
SMPD4-202ENST00000409031 LIPGQ9Y5X9 500 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 OR4C45A6NMZ5 311 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 HSBP1O75506 76 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 OR8U8P0C7N1 319 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 GABRA2P47869 451 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 SULT1A2P50226 295 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 LHFPL2Q6ZUX7 228 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 NT5CQ8TCD5 201 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 FGF22Q9HCT0 170 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 FRRS1LQ9P0K9 344 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 GPR37O15354 613 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 ALOX12BO75342 701 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 RECKO95980 971 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 ACAA1P09110 424 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-202ENST00000409031 FOXO1Q12778 655 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 MRPL43Q8N983 215 aaKnown RBP15.85■□□□□ 0.13
SMPD4-202ENST00000409031 SLC24A4Q8NFF2 622 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 CIB3Q96Q77 187 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-202ENST00000409031 NPDC1Q9NQX5 325 aaPredicted RBP15.85■□□□□ 0.13
SMPD4-202ENST00000409031 FKBP11Q9NYL4 201 aa15.85■□□□□ 0.13
SMPD4-202ENST00000409031 M0R135 149 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 GCM2O75603 506 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-202ENST00000409031 TIMP1P01033 207 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 CSNK1EP49674 416 aaKnown RBP15.84■□□□□ 0.13
SMPD4-202ENST00000409031 JMJD6Q6NYC1 403 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-202ENST00000409031 OR2T10Q8NGZ9 312 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 ST8SIA1Q92185 356 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 ZNF799Q96GE5 643 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 TBC1D29Q9UFV1 150 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 GOLT1BQ9Y3E0 138 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 FAM221AA4D161 298 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 P2RY1P47900 373 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 LHX6Q9UPM6 363 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 SCGB2A1O75556 95 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 IAPPP10997 89 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 ISXQ2M1V0 245 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 BSXQ3C1V8 233 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 ABLIM2Q6H8Q1 611 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 H2BFWTQ7Z2G1 175 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 ZNF596Q8TC21 504 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 NAA60Q9H7X0 242 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 DNAJB12Q9NXW2 375 aaKnown RBP15.84■□□□□ 0.13
SMPD4-202ENST00000409031 THAP10Q9P2Z0 257 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-202ENST00000409031 H3BP45 60 aa15.84■□□□□ 0.13
SMPD4-202ENST00000409031 DUXBA0A1W2PPF3 345 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 C1QCP02747 245 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 ICAM2P13598 275 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 GJA4P35212 333 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 THBS4P35443 961 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 RAB30Q15771 203 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 BAHD1Q8TBE0 780 aaPredicted RBP15.83■□□□□ 0.13
SMPD4-202ENST00000409031 GSN-AS1Q9NRJ2 163 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 MED29Q9NX70 200 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 IL17BQ9UHF5 180 aa15.83■□□□□ 0.13
SMPD4-202ENST00000409031 OLFM2O95897 454 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 HNF1AP20823 631 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 ASCL1P50553 236 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 SLC10A1Q14973 349 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 M1APQ8TC57 530 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 HLA-CQ95604 372 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 PCM1Q15154 2024 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 TRBV23-1A0A0A0MS06 115 aa15.83■□□□□ 0.12
SMPD4-202ENST00000409031 MED19A0JLT2 244 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms