RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 PRKACBP22694 351 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 GNG2P59768 71 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 CNN3Q15417 329 aaKnown RBP21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 CLVS2Q5SYC1 327 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 OR51T1Q8NGJ9 327 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 C1QTNF5Q9BXJ0 243 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 PRDM14Q9GZV8 571 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 ELL3Q9HB65 397 aaPredicted RBP21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 B3GNT2Q9NY97 397 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 ZNF175Q9Y473 711 aa21.46■■□□□ 1.03
DNMT3A-206ENST00000406659 TRAV17A0A0B4J275 112 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 SNRPGP15A8MWD9 76 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 TM4SF5O14894 197 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 ATP6V1G1O75348 118 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 HLA-HP01893 362 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 CD79AP11912 226 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 MTCP1P56278 107 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 RPS27AP62979 156 aaKnown RBP21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 ZNF92Q03936 586 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 CLN3Q13286 438 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 MEF2DQ14814 521 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 BPIFB2Q8N4F0 458 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 ZFAND1Q8TCF1 268 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 CPNE2Q96FN4 548 aaPredicted RBP21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 HYLS1Q96M11 299 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 C12orf49Q9H741 205 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 PLSCR3Q9NRY6 295 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 SCP2D1Q9UJQ7 156 aa21.45■■□□□ 1.02
DNMT3A-206ENST00000406659 DISC1C4P0D8 188 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 HIST1H1DP16402 221 aaKnown RBP21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 FAM3AP98173 230 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 TNK1Q13470 666 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 SF3B4Q15427 424 aaKnown RBP eCLIP21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 NCCRP1Q6ZVX7 275 aaPredicted RBP21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 SLC36A1Q7Z2H8 476 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 GVQW1Q8N7I0 195 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 STEAP2Q8NFT2 490 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 OR4S1Q8NGB4 309 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 IRF2BPLQ9H1B7 796 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 DLL3Q9NYJ7 618 aa21.44■■□□□ 1.02
DNMT3A-206ENST00000406659 hCG_38984A0A1B0GV85 526 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 NRASP01111 189 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 VSIG10L2P0DP72 767 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 COX5BP10606 129 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 MGMTP16455 207 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 AGTR1P30556 359 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 ARR3P36575 388 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 PRSS12P56730 875 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 RNASE10Q5GAN6 216 aaKnown RBP21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 ZNF626Q68DY1 528 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 TMEM53Q6P2H8 277 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 IDO2Q6ZQW0 420 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 P4HA3Q7Z4N8 544 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 OR10K1Q8NGX5 313 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 SLC25A21Q9BQT8 299 aaPredicted RBP21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 TMEM246Q9BRR3 403 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 LRFN3Q9BTN0 628 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 RANBP3Q9H6Z4 567 aaPredicted RBP21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 GP6Q9HCN6 339 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 PRSS50Q9UI38 385 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 FREM1Q5H8C1 2179 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 FAM230AA0A1W2PPH8 454 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 SSX5O60225 188 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 IGHG3P01860 377 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 TMEM225BP0DP42 221 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 EDN3P14138 238 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 SERPINA2P20848 420 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 RTP5Q14D33 572 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 PLAC9Q5JTB6 97 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 FAM89BQ8N5H3 189 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 KCNK7Q9Y2U2 307 aa21.43■■□□□ 1.02
DNMT3A-206ENST00000406659 CNOT1A5YKK6 2376 aaKnown RBP21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 LOC100509620A0A075B734 347 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 ZNF735P0CB33 412 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 CCNOP22674 350 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 TMEM50BP56557 158 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 ZP1P60852 638 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 PNLIPRP3Q17RR3 467 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 RTN4RL2Q86UN3 420 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 SLC6A7Q99884 636 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 ZNF436Q9C0F3 470 aaPredicted RBP21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 PLEKHA6Q9Y2H5 1048 aa21.42■■□□□ 1.02
DNMT3A-206ENST00000406659 UBE2QL1A1L167 161 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 RGS13O14921 159 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 CSN2P05814 226 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 TMEM42Q69YG0 159 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 COLCA1Q6ZS62 124 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 LHFPL2Q6ZUX7 228 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 SPSB4Q96A44 273 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 ARHGAP5-AS1Q96IT6 56 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 MGAT4CQ9UBM8 478 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 C5orf49A4QMS7 147 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 RAB1AP62820 205 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 PLP2Q04941 152 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 OR8B8Q15620 311 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 NKPD1Q17RQ9 610 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 SCGB2B2Q4G0G5 96 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 OR52W1Q6IF63 320 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 CD163Q86VB7 1156 aa21.41■■□□□ 1.02
DNMT3A-206ENST00000406659 SPICQ8N5J4 248 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms