RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 NEK6Q9HC98 313 aa18.81■□□□□ 0.6
EPCAM-202ENST00000405271 TMEM138Q9NPI0 162 aa18.81■□□□□ 0.6
EPCAM-202ENST00000405271 CHD3Q12873 2000 aaKnown RBP18.81■□□□□ 0.6
EPCAM-202ENST00000405271 CREBBPQ92793 2442 aa18.81■□□□□ 0.6
EPCAM-202ENST00000405271 A0A1W2PPW3 197 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 TIMM8AO60220 97 aaPredicted RBP18.8■□□□□ 0.6
EPCAM-202ENST00000405271 GMDSO60547 372 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 NRASP01111 189 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 MAS1P04201 325 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 MXD1Q05195 221 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 TMEM255AQ5JRV8 349 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 CEP78Q5JTW2 689 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 BHLHE23Q8NDY6 225 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 DYNC2LI1Q8TCX1 351 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 PIGCQ92535 297 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 CGGBP1Q9UFW8 167 aaPredicted RBP18.8■□□□□ 0.6
EPCAM-202ENST00000405271 RHBDD3Q9Y3P4 386 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 MPC1Q9Y5U8 109 aa18.8■□□□□ 0.6
EPCAM-202ENST00000405271 ANXA2P2A6NMY6 339 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 ATF1P18846 271 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 BDKRB2P30411 391 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 RPS19P39019 145 aaKnown RBP18.79■□□□□ 0.6
EPCAM-202ENST00000405271 PSMD7P51665 324 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 PRDX4Q13162 271 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 MSMPQ1L6U9 139 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 CROCCP3Q8IVE0 287 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 ZDHHC23Q8IYP9 409 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 OR5AS1Q8N127 324 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 OR8G5Q8NG78 346 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 OR51A2Q8NGJ7 313 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 SPSB1Q96BD6 273 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 C14orf79Q96F83 325 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 HS3ST6Q96QI5 342 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 GPR173Q9NS66 373 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 CCDC59Q9P031 241 aaKnown RBP18.79■□□□□ 0.6
EPCAM-202ENST00000405271 FZR1Q9UM11 496 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 ALDOBP05062 364 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 SSTR2P30874 369 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 UBE2V2Q15819 145 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 CNPY1Q3B7I2 92 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 SLC25A46Q96AG3 418 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 SLC22A4Q9H015 551 aa18.79■□□□□ 0.6
EPCAM-202ENST00000405271 NOP16Q9Y3C1 178 aaKnown RBP18.79■□□□□ 0.6
EPCAM-202ENST00000405271 ZNF850A8MQ14 1090 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 E7EQL1 145 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 MAGEB3O15480 346 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 CLEC2LP0C7M8 214 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 OCMP0CE72 109 aaPredicted RBP18.78■□□□□ 0.6
EPCAM-202ENST00000405271 ADRA2CP18825 462 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 PRKACBP22694 351 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 AZGP1P25311 298 aaKnown RBP18.78■□□□□ 0.6
EPCAM-202ENST00000405271 ADIPOQQ15848 244 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 MOGQ16653 247 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 ZNF672Q499Z4 452 aaPredicted RBP18.78■□□□□ 0.6
EPCAM-202ENST00000405271 PLCXD3Q63HM9 321 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 CDH26Q8IXH8 852 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 CPNE2Q96FN4 548 aaPredicted RBP18.78■□□□□ 0.6
EPCAM-202ENST00000405271 DCUN1D5Q9BTE7 237 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 MRPL37Q9BZE1 423 aaKnown RBP18.78■□□□□ 0.6
EPCAM-202ENST00000405271 TPK1Q9H3S4 243 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 DUSP13Q9UII6 198 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 GPR160Q9UJ42 338 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 AK6Q9Y3D8 172 aaKnown RBP18.78■□□□□ 0.6
EPCAM-202ENST00000405271 V9GY05 133 aa18.78■□□□□ 0.6
EPCAM-202ENST00000405271 TANC2Q9HCD6 1990 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 ARFGEF3Q5TH69 2177 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 IGKV1-9A0A0C4DH69 117 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 NOTOA8MTQ0 251 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 LILRA1O75019 489 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 PLAUP00749 431 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 HCKP08631 526 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 ZNF182P17025 639 aaPredicted RBP18.77■□□□□ 0.6
EPCAM-202ENST00000405271 SOX6P35712 828 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 ALKBH6Q3KRA9 238 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 DDI2Q5TDH0 399 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 GLT8D1Q68CQ7 371 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 MOB3CQ70IA8 216 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 DNAAF1Q8NEP3 725 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 FOXRED1Q96CU9 486 aaPredicted RBP18.77■□□□□ 0.6
EPCAM-202ENST00000405271 GFI1Q99684 422 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 SYT3Q9BQG1 590 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 SLC30A2Q9BRI3 323 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 SLC7A11Q9UPY5 501 aa18.77■□□□□ 0.6
EPCAM-202ENST00000405271 POLQO75417 2590 aa18.77■□□□□ 0.59
EPCAM-202ENST00000405271 A0A0G2JK05 382 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 A6NNC1 897 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 TMEM127O75204 238 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 OR4A8P0C604 315 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 APOBEC3AP31941 199 aaPredicted RBP18.76■□□□□ 0.59
EPCAM-202ENST00000405271 EVX1P49640 407 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 RORCP51449 518 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 OR10A3P58181 314 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 HNRNPA0Q13151 305 aaKnown RBP18.76■□□□□ 0.59
EPCAM-202ENST00000405271 LRP11Q86VZ4 500 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 NR2C2APQ86WQ0 139 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 DHRS9Q9BPW9 319 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 ADAT1Q9BUB4 502 aaKnown RBP18.76■□□□□ 0.59
EPCAM-202ENST00000405271 PLK3Q9H4B4 646 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 CYSLTR2Q9NS75 346 aa18.76■□□□□ 0.59
EPCAM-202ENST00000405271 TMEM100Q9NV29 134 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms