RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 RNASE12Q5GAN4 147 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 LINC00299Q6ZSB3 139 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 LRRC28Q86X40 367 aaPredicted RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 FTMTQ8N4E7 242 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 PNLDC1Q8NA58 520 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 OR4M1Q8NGD0 313 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 OR6M1Q8NGM8 313 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 SLC25A40Q8TBP6 338 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 BORCS5Q969J3 196 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 SPSB4Q96A44 273 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 WBP1Q96G27 269 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 S100A13Q99584 98 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 METTL17Q9H7H0 456 aaPredicted RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 NEK6Q9HC98 313 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CRIM1Q9NZV1 1036 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 KCNN3Q9UGI6 736 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ERRFI1Q9UJM3 462 aaPredicted RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 SLC7A11Q9UPY5 501 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 A0A0G2JMP0 313 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 A0A0X1KG70 313 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 LOC100289279A0A1B0GTE1 492 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 DHRS7CA6NNS2 312 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ANKRD30BLA7E2S9 258 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 IGLV1-44P01699 117 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ZNF35P13682 527 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CA6P23280 308 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 GRNP28799 593 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 MPV17P39210 176 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 EFNB2P52799 333 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ART1P52961 327 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 PPP5CP53041 499 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ADORA2A-AS1P86434 159 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 PRDX4Q13162 271 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 SNTB2Q13425 540 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 CNN3Q15417 329 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 CDSNQ15517 529 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ALKBH6Q3KRA9 238 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 SLC22A6Q4U2R8 563 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 UBE2NLQ5JXB2 153 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ZNF529Q6P280 563 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 MTFR2Q6P444 385 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 GLIPR1L1Q6UWM5 242 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 UNQ6126/PRO20091Q6UXV3 157 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 UTS2BQ765I0 119 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CMTM4Q8IZR5 234 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 BATF2Q8N1L9 274 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CCDC54Q8NEL0 328 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 OR4M2Q8NGB6 313 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 KLF14Q8TD94 323 aaPredicted RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 TNFAIP8L1Q8WVP5 186 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 PHF21AQ96BD5 680 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 FOXRED1Q96CU9 486 aaPredicted RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 C10orf35Q96D05 121 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 BORCS8Q96FH0 119 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 BOD1Q96IK1 185 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 WDFY2Q96P53 400 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 HIST1H2AAQ96QV6 131 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 RHBDL2Q9NX52 303 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 JKAMPQ9P055 326 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 DUSP13Q9UII6 198 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 V9GYH0 126 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 TMEM272A0A1B0GTI8 110 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ATP6V1G2-DDX39BF2Z307 99 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 SPRY1O43609 319 aaPredicted RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 ANGPTL7O43827 346 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 APOA1P02647 267 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 TMEM225BP0DP42 221 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CALCBP10092 127 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 GCH1P30793 250 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ETV6P41212 452 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ASCL1P50553 236 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 GPM6AP51674 278 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 DYNC1I2Q13409 638 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 ZNF79Q15937 498 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 PIP4P2Q8N4L2 257 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 OR10K1Q8NGX5 313 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 LINC01560Q8TB33 94 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ZFAND2BQ8WV99 257 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 SLC25A28Q96A46 364 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 S100A16Q96FQ6 103 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 WFIKKN1Q96NZ8 548 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 BBC3Q96PG8 261 aaPredicted RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 UQCC2Q9BRT2 126 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ATG5Q9H1Y0 275 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 BANF2Q9H503 90 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CYSLTR2Q9NS75 346 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ING4Q9UNL4 249 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 MRPS28Q9Y2Q9 187 aaKnown RBP3.19□□□□□ -1.9
RTN4-208ENST00000404909 IGKV1-27A0A075B6S5 117 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 A0A1W2PP11 408 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 ABCD4O14678 606 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 TIMM8AO60220 97 aaPredicted RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 ZG16O60844 167 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CRTAPO75718 401 aaPredicted RBP3.18□□□□□ -1.9
RTN4-208ENST00000404909 PRKACBP22694 351 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CDK2P24941 298 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CD40P25942 277 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 CD40LGP29965 261 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 PTGFRP43088 359 aa3.18□□□□□ -1.9
RTN4-208ENST00000404909 PITPNBP48739 271 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms