RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SYNPRQ8TBG9 265 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 RND1Q92730 232 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 SLC25A38Q96DW6 304 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 ELOVL5Q9NYP7 299 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 A0A1W2PR80 420 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 TPPPO94811 219 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 BPNT1O95861 308 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 AZGP1P25311 298 aaKnown RBP18.13■□□□□ 0.49
TPM1-208ENST00000404484 COL8A1P27658 744 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 WNT5AP41221 380 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 GK2Q14410 553 aaPredicted RBP18.13■□□□□ 0.49
TPM1-208ENST00000404484 RGS21Q2M5E4 152 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 C2orf76Q3KRA6 126 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 CMTM4Q8IZR5 234 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 CSNK2A3Q8NEV1 391 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 C15orf40Q8WUR7 153 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 PTX4Q96A99 478 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 SDHCQ99643 169 aaPredicted RBP18.13■□□□□ 0.49
TPM1-208ENST00000404484 CNTD2Q9H8S5 307 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 KCNN3Q9UGI6 736 aa18.13■□□□□ 0.49
TPM1-208ENST00000404484 IGLV1-44P01699 117 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 DEFA1P59665 94 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 DEFA3P59666 94 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 C3orf36Q3SXR2 165 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 TMEM42Q69YG0 159 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 PAQR4Q8N4S7 273 aaPredicted RBP18.12■□□□□ 0.49
TPM1-208ENST00000404484 HAVCR1Q96D42 359 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 MUCL1Q96DR8 90 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 GPER1Q99527 375 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 PTTG3PQ9NZH4 202 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 STARD10Q9Y365 291 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 SLC25A15Q9Y619 301 aa18.12■□□□□ 0.49
TPM1-208ENST00000404484 IGKV1-9A0A0C4DH69 117 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 GGT3PA6NGU5 568 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 NRASP01111 189 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 CELA3BP08861 270 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 UBBP0CG47 229 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 AGAP20933 346 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 UBE2V2Q15819 145 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 LYSMD2Q8IV50 215 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 Q8N402 240 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 OR4D6Q8NGJ1 314 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 PIGTQ969N2 578 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 SLC7A11Q9UPY5 501 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 RHBDD3Q9Y3P4 386 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 ADGRG4Q8IZF6 3080 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 CENPEQ02224 2701 aa18.11■□□□□ 0.49
TPM1-208ENST00000404484 GMDSO60547 372 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 NGFP01138 241 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 RAB6AP20340 208 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 TUBG1P23258 451 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 TNK1Q13470 666 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 STEAP3Q658P3 488 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 AWAT2Q6E213 333 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 RFPL4BQ6ZWI9 263 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 SSX8Q7RTT4 187 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 C1orf174Q8IYL3 243 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 PHF21AQ96BD5 680 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 TUBG2Q9NRH3 451 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 GPR173Q9NS66 373 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 GHRLQ9UBU3 117 aa18.1■□□□□ 0.49
TPM1-208ENST00000404484 A0A0G2JMP0 313 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 A0A0X1KG70 313 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 TMEM272A0A1B0GTI8 110 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 SMPD2O60906 423 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 IFITM3Q01628 133 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 KISS1Q15726 138 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 TRIQKQ629K1 86 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 LHFPL2Q6ZUX7 228 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 KRT74Q7RTS7 529 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 SNX29P2Q8IUI4 249 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 ZNF101Q8IZC7 436 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 OR4M2Q8NGB6 313 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 OR56B2PQ8NGI1 322 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 S100PBPQ96BU1 408 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 OR10A4Q9H209 315 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 DIABLOQ9NR28 239 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 JKAMPQ9P055 326 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 FBLN5Q9UBX5 448 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 MRPS28Q9Y2Q9 187 aaKnown RBP18.09■□□□□ 0.49
TPM1-208ENST00000404484 CRYBG3Q68DQ2 2970 aa18.09■□□□□ 0.49
TPM1-208ENST00000404484 IL7P13232 177 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 MNDAP41218 407 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 SCN1BQ07699 218 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 FAM189A2Q15884 450 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 TMEM69Q5SWH9 247 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 OR2W3Q7Z3T1 314 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 MYPOPQ86VE0 399 aaPredicted RBP18.08■□□□□ 0.49
TPM1-208ENST00000404484 ANGPTL5Q86XS5 388 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 MINDY2Q8NBR6 621 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 SETD6Q8TBK2 473 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 UBASH3BQ8TF42 649 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 ACTR6Q9GZN1 396 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 C14orf119Q9NWQ9 140 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 RAB22AQ9UL26 194 aa18.08■□□□□ 0.49
TPM1-208ENST00000404484 A0A0A6YYH2 397 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 A6NJ64 397 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 LDLRAD4O15165 306 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 CTDSPLO15194 276 aa18.08■□□□□ 0.48
TPM1-208ENST00000404484 SCGNO76038 276 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms