RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TMEM163Q8TC26 289 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 OR5P3Q8WZ94 311 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 RPL3LQ92901 407 aaKnown RBP11.05□□□□□ -0.64
SDF4-203ENST00000403997 DUS3LQ96G46 650 aaKnown RBP11.05□□□□□ -0.64
SDF4-203ENST00000403997 ZNF48Q96MX3 618 aaPredicted RBP11.05□□□□□ -0.64
SDF4-203ENST00000403997 OR8B4Q96RC9 309 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 IL4I1Q96RQ9 567 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 CNN2Q99439 309 aaKnown RBP11.05□□□□□ -0.64
SDF4-203ENST00000403997 PKP2Q99959 881 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 PCGF1Q9BSM1 259 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 PBOV1Q9GZY1 135 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 SEMA6AQ9H2E6 1030 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 SMURF1Q9HCE7 757 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 FAM206AQ9NX38 181 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
SDF4-203ENST00000403997 A0A0U1RQV5 110 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 DNAJC9-AS1A6NH13 148 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 SLC22A31A6NKX4 558 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 TMEM210A6NLX4 147 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 PRR32B1ATL7 298 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 PLATP00750 562 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 PRTN3P24158 256 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 CFPP27918 469 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 EFNB1P98172 346 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 ZNF829Q3KNS6 432 aaPredicted RBP11.04□□□□□ -0.64
SDF4-203ENST00000403997 GPR157Q5UAW9 335 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 AADACL4Q5VUY2 407 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 NXNL2Q5VZ03 156 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 C12orf73Q69YU5 71 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 BTN2A1Q7KYR7 527 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 SLC35F2Q8IXU6 374 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 ZDHHC23Q8IYP9 409 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 C3orf56Q8N813 242 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 PNLDC1Q8NA58 520 aaKnown RBP11.04□□□□□ -0.64
SDF4-203ENST00000403997 OR5T2Q8NGG2 359 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 ST8SIA4Q92187 359 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 SEH1LQ96EE3 360 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 CCL13Q99616 98 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 CIB1Q99828 191 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 GABARAPL1Q9H0R8 117 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 TLNRD1Q9H1K6 362 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 KAAG1Q9UBP8 84 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 DNAJB11Q9UBS4 358 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 ENOPH1Q9UHY7 261 aa11.04□□□□□ -0.64
SDF4-203ENST00000403997 ZNF816-ZNF321PA0A0X1KG74 233 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 ZNF879B4DU55 563 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 ZNF670-ZNF695F2Z2N8 137 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 TOX4O94842 621 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 ECDO95905 644 aaPredicted RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 SFTPBP07988 381 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 DCTDP32321 178 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 POLR2IP36954 125 aaKnown RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 COMPP49747 757 aaPredicted RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 GPM6AP51674 278 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 CXCR4P61073 352 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 ACTR3P61158 418 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 ELF3P78545 371 aaPredicted RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 WDR38Q5JTN6 314 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 ZNF322Q6U7Q0 402 aaPredicted RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 C9orf139Q6ZV77 190 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 SLC36A1Q7Z2H8 476 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 THAP5Q7Z6K1 395 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 SCCPDHQ8NBX0 429 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 OR10Z1Q8NGY1 313 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 OR51E1Q8TCB6 317 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 PPP1R14AQ96A00 147 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 CENPNQ96H22 339 aaPredicted RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 FAM71F1Q96KD3 344 aaPredicted RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 WDFY2Q96P53 400 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 MNTQ99583 582 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 APOL4Q9BPW4 351 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 FGF23Q9GZV9 251 aaPredicted RBP11.03□□□□□ -0.64
SDF4-203ENST00000403997 ADGRL4Q9HBW9 690 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 GPR84Q9NQS5 396 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 HAO2Q9NYQ3 351 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 OAZ3Q9UMX2 235 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 GTF2A1LQ9UNN4 478 aa11.03□□□□□ -0.64
SDF4-203ENST00000403997 A0A1B0GW55 424 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 SRRM5B3KS81 715 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 ZNF732B4DXR9 585 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 LOC110117498-PIK3R3F6TDL0 507 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 P2RY10O00398 339 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 MAGEB4O15481 346 aaPredicted RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 AKR7A2O43488 359 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 FCN3O75636 299 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4L2P0CJ85 424 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4L3P0CJ86 424 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4L4P0CJ87 422 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4L5P0CJ88 424 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4L6P0CJ89 424 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4L7P0CJ90 424 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 ATP6V1B1P15313 513 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 BPIFB3P59826 476 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 ARF6P62330 175 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 GNG3P63215 75 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 MFGE8Q08431 387 aaPredicted RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 RIPPLY1Q0D2K3 151 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms