RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM120AQ9BXJ8 343 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DNTTIP1Q9H147 329 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SP140LQ9H930 580 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ENPP4Q9Y6X5 453 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 A0A1W2PRQ8 180 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 MRASO14807 208 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ARPC3O15145 178 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SYNGR1O43759 233 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RHBDL1O75783 438 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ZNF682O95780 498 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 HLA-DQA2P01906 255 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 TROVE2P10155 538 aaKnown RBP eCLIP9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CCL3L1P16619 93 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ACKR3P25106 362 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 POU1F1P28069 291 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 IFNA8P32881 189 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 GRK5P34947 590 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DGCR6Q14129 220 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 IFI44LQ53G44 452 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SLC35F1Q5T1Q4 408 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ETV3LQ6ZN32 361 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CCDC121Q6ZUS5 278 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DCXRQ7Z4W1 244 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FAM185AQ8N0U4 392 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 LINC00482Q8N8I6 264 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CYB561A3Q8NBI2 242 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR5AU1Q8NGC0 362 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR51L1Q8NGJ5 315 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR5D13Q8NGL4 314 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 HPSE2Q8WWQ2 592 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 LZICQ8WZA0 190 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SH3GL1Q99961 368 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR52D1Q9H346 318 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ANKRD19PQ9H560 264 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NDUFAF4Q9P032 175 aa9.54□□□□□ -0.88
SPTLC1P3-201ENST00000403408 TRBV23-1A0A0A0MS06 115 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR2AT4A6NND4 320 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ANKRD30BLA7E2S9 258 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RENP00797 406 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 H1F0P07305 194 aaKnown RBP9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 PSG2P11465 335 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NAA10P41227 235 aaPredicted RBP9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 GSK3AP49840 483 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 GSK3BP49841 420 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DLX6P56179 175 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SLC35A2P78381 396 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 MZT1Q08AG7 82 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ZNF273Q14593 569 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FAM76BQ5HYJ3 339 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 TMEM200BQ69YZ2 307 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FAM86B1Q8N7N1 296 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR10Z1Q8NGY1 313 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FANK1Q8TC84 345 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SLAMF6Q96DU3 332 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 MED30Q96HR3 178 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 REEP6Q96HR9 211 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RCC1LQ96I51 464 aaKnown RBP9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 C7orf34Q96L11 122 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DHRS1Q96LJ7 313 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 KCNJ15Q99712 375 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 COPS4Q9BT78 406 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NDEL1Q9GZM8 345 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NLKQ9UBE8 527 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 COMMD3-BMI1R4GMX3 469 aa9.53□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ODF3BA8MYP8 253 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CXCR6O00574 342 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TBX1O43435 398 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SERPINA1P01009 418 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PF4V1P10720 104 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 FAHP16930 419 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 DDOSTP39656 456 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GABRA2P47869 451 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 KLF10Q13118 480 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 BLMHQ13867 455 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 COQ5Q5HYK3 327 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 DMRTC1Q5HYR2 192 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 FGD3Q5JSP0 725 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 AGBL2Q5U5Z8 902 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF782Q6ZMW2 699 aaPredicted RBP9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RRM2BQ7LG56 351 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SLC15A3Q8IY34 581 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF511Q8NB15 262 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OR52J3Q8NH60 311 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OR5K1Q8NHB7 308 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OR5P3Q8WZ94 311 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 MYDGFQ969H8 173 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 LYZL4Q96KX0 146 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 AMELYQ99218 206 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 YY1AP1Q9H869 796 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CENPMQ9NSP4 180 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 KCNG2Q9UJ96 466 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 U3KQK5 164 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 FRAS1Q86XX4 4008 aa9.52□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF850A8MQ14 1090 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 XRCC2O43543 280 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TIPRLO75663 272 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CCDC159P0C7I6 412 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 NCK1P16333 377 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms