RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 KAAG1Q9UBP8 84 aa13.16□□□□□ -0.3
ATG4B-203ENST00000400772 DUX4Q9UBX2 424 aa13.16□□□□□ -0.3
ATG4B-203ENST00000400772 ZNF391Q9UJN7 358 aa13.16□□□□□ -0.3
ATG4B-203ENST00000400772 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
ATG4B-203ENST00000400772 A0A0U1RQV5 110 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 MAGEB4O15481 346 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-203ENST00000400772 SRSF10O75494 262 aaKnown RBP13.15□□□□□ -0.3
ATG4B-203ENST00000400772 FCGR1AP12314 374 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 COMPP49747 757 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-203ENST00000400772 FGF12P61328 243 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 C9orf139Q6ZV77 190 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 RPL3LQ92901 407 aaKnown RBP13.15□□□□□ -0.3
ATG4B-203ENST00000400772 TECTBQ96PL2 329 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 IL4I1Q96RQ9 567 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 CNN2Q99439 309 aaKnown RBP13.15□□□□□ -0.3
ATG4B-203ENST00000400772 PKP2Q99959 881 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 MICU1Q9BPX6 476 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 PRRG3Q9BZD7 231 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 HAO2Q9NYQ3 351 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 OAZ3Q9UMX2 235 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 TMEM14AQ9Y6G1 99 aa13.15□□□□□ -0.3
ATG4B-203ENST00000400772 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 SRRM5B3KS81 715 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
ATG4B-203ENST00000400772 ZNF254O75437 659 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 MMP9P14780 707 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 MUC1P15941 1255 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-203ENST00000400772 AMY2BP19961 511 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 CXCR4P61073 352 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-203ENST00000400772 MICBQ29980 383 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 CD276Q5ZPR3 534 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 SLC35F2Q8IXU6 374 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 FGFRL1Q8N441 504 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 FTMTQ8N4E7 242 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 CENPNQ96H22 339 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-203ENST00000400772 RNF170Q96K19 258 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 CCL13Q99616 98 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 APOL4Q9BPW4 351 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 RTL8AQ9BWD3 113 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-203ENST00000400772 ABCB9Q9NP78 766 aa13.14□□□□□ -0.31
ATG4B-203ENST00000400772 H2AFY2Q9P0M6 372 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-203ENST00000400772 TRAV40A0A0B4J280 105 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 ZNF816-ZNF321PA0A0X1KG74 233 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 TMEM210A6NLX4 147 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 DVL1O14640 695 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 TMPRSS2O15393 492 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 CIB2O75838 187 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 RIDAP52758 137 aaKnown RBP13.13□□□□□ -0.31
ATG4B-203ENST00000400772 ACTG1P63261 375 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 WDR38Q5JTN6 314 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 ZNF322Q6U7Q0 402 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-203ENST00000400772 C12orf54Q6X4T0 127 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 ZDHHC23Q8IYP9 409 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 SCCPDHQ8NBX0 429 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 OR10Z1Q8NGY1 313 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 OR51E1Q8TCB6 317 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 PYDC1Q8WXC3 89 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 DUX5Q96PT3 197 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 OSBPL10Q9BXB5 764 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 GABARAPL3Q9BY60 117 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 WDR13Q9H1Z4 485 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 GPR84Q9NQS5 396 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 CLN6Q9NWW5 311 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 NUFIP1Q9UHK0 495 aaKnown RBP13.13□□□□□ -0.31
ATG4B-203ENST00000400772 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
ATG4B-203ENST00000400772 IKZF2Q9UKS7 526 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 FBN3Q75N90 2809 aa13.13□□□□□ -0.31
ATG4B-203ENST00000400772 DNAJC9-AS1A6NH13 148 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 SAC3D1A6NKF1 404 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 TTRP02766 147 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 LIPFP07098 398 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 SFTPBP07988 381 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 PRTN3P24158 256 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 CFPP27918 469 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 MAP2K3P46734 347 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 ACTR3P61158 418 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 BAMBIQ13145 260 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 ZNF829Q3KNS6 432 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-203ENST00000400772 CEACAM21Q3KPI0 293 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 DMRTC1Q5HYR2 192 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 ATPAF1Q5TC12 328 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-203ENST00000400772 RBMS3Q6XE24 437 aaKnown RBP13.12□□□□□ -0.31
ATG4B-203ENST00000400772 PLEKHG7Q6ZR37 379 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 KCTD8Q6ZWB6 473 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 BTN2A1Q7KYR7 527 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 SSX6Q7RTT6 188 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 GID4Q8IVV7 300 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 OR5T2Q8NGG2 359 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 OR51G2Q8NGK0 314 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 FAM81AQ8TBF8 368 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-203ENST00000400772 C12orf43Q96C57 262 aaKnown RBP13.12□□□□□ -0.31
ATG4B-203ENST00000400772 FAM71F1Q96KD3 344 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-203ENST00000400772 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-203ENST00000400772 TBX15Q96SF7 602 aa13.12□□□□□ -0.31
ATG4B-203ENST00000400772 MNTQ99583 582 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms