RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 A8MXK9 166 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 TNFSF11O14788 317 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 ATG12O94817 140 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 TMEM50BP56557 158 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 MISPQ8IVT2 679 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF837Q96EG3 531 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 OR10C1Q96KK4 312 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 CCDC74BQ96LY2 380 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 UTP23Q9BRU9 249 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 CD80P33681 288 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 TMEM128Q5BJH2 165 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 FAM76BQ5HYJ3 339 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 RPL7L1Q6DKI1 246 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 RHBDD2Q6NTF9 364 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 HSD17B13Q7Z5P4 300 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 SULF2Q8IWU5 870 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 PHF7Q9BWX1 381 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 ALX4Q9H161 411 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 TO15178 435 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 DUS4LO95620 317 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 RAB6AP20340 208 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 OMGP23515 440 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 PPT1P50897 306 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 DHODHQ02127 395 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 PLPPR5Q32ZL2 321 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 OGFOD3Q6PK18 319 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 OR14L1PQ8NHC6 308 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 PIGCQ92535 297 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 C5orf66Q9H5L9 145 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 B3GAT1Q9P2W7 334 aa11.17□□□□□ -0.62
PPP4R1-202ENST00000400555 TUBAL3A6NHL2 446 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 E9PLN8 166 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 M0R036 132 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 ABCD4O14678 606 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 MTRF1O75570 445 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 GP1BAP07359 652 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 CHRM2P08172 466 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 ICAM2P13598 275 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 NFYBP25208 207 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 ANKRD55Q3KP44 614 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 OR5AP2Q8NGF4 316 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 OR5L1Q8NGL2 311 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 BCL2L14Q9BZR8 327 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 AUP1Q9Y679 476 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 TPRP12270 2363 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 A0A1B0GTI1 187 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 MBTPS2O43462 519 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 IFNA21P01568 189 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 B4GALT1P15291 398 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 CBR1P16152 277 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 FSTP19883 344 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 PTGFRP43088 359 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 C5orf46Q6UWT4 87 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 ZSCAN4Q8NAM6 433 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 PLPP5Q8NEB5 264 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 SPACA9Q96E40 222 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 MRGPRX4Q96LA9 322 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 GPHA2Q96T91 129 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 C19orf25Q9UFG5 118 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 FLVCR1Q9Y5Y0 555 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 FER1L5A0AVI2 2057 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 M0R135 149 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 CCL4P13236 92 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 RPS18P62269 152 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 SSBP1Q04837 148 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 PGAP1Q75T13 922 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 POC1BQ8TC44 478 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF799Q96GE5 643 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF442Q9H7R0 627 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 FN3KRPQ9HA64 309 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■□□ 18.1
PPP4R1-202ENST00000400555 ZNF581Q9P0T4 197 aa11.16□□□□□ -0.62
PPP4R1-202ENST00000400555 A0A1W2PQM1 296 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 TMEM127O75204 238 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 CCL3P10147 92 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 PUSL1Q8N0Z8 303 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 OR5AS1Q8N127 324 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 HSD17B11Q8NBQ5 300 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 FNDC9Q8TBE3 224 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 OXGR1Q96P68 337 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF629Q9UEG4 869 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 WDFY3Q8IZQ1 3526 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 H0YIZ8 118 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 CD74P04233 296 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 CYCSP99999 105 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 OR2A2Q6IF42 318 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 LPCAT3Q6P1A2 487 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 DEGS2Q6QHC5 323 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 DOK3Q7L591 496 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 OVCH2Q7RTZ1 564 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 EIF5A2Q9GZV4 153 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 SMOC1Q9H4F8 434 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 LDAHQ9H6V9 325 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 R4GN57 208 aa11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 PTPRZ1P23471 2315 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-202ENST00000400555 TRAF3IP2O43734 574 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms