RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 OR10Z1Q8NGY1 313 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 LRRC29Q8WV35 223 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 C12orf43Q96C57 262 aaKnown RBP12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 PKP2Q99959 881 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 PPP1R3EQ9H7J1 279 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 ADGRL4Q9HBW9 690 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 ESM1Q9NQ30 184 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 NUFIP1Q9UHK0 495 aaKnown RBP12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 OAZ3Q9UMX2 235 aa12.36□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF816-ZNF321PA0A0X1KG74 233 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF850A8MQ14 1090 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 PSMD9O00233 223 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 GYPAP02724 150 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 IGHV4-38-2P0DP08 117 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 COMPP49747 757 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 ACTR3P61158 418 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 ZBTB37Q5TC79 503 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF322Q6U7Q0 402 aaPredicted RBP12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 RBMS3Q6XE24 437 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 SLC35F2Q8IXU6 374 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 FAM81AQ8TBF8 368 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 HPSE2Q8WWQ2 592 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 IL4I1Q96RQ9 567 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 SEMA6AQ9H2E6 1030 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 MOB1AQ9H8S9 216 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 ZMAT3Q9HA38 289 aaKnown RBP12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 SMURF1Q9HCE7 757 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 CLN6Q9NWW5 311 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 IKZF2Q9UKS7 526 aa12.35□□□□□ -0.43
SMIM11A-203ENST00000399299 TRAV40A0A0B4J280 105 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 ZNF670-ZNF695F2Z2N8 137 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 CDIPTO14735 213 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 SRSF10O75494 262 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 ECDO95905 644 aaPredicted RBP12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 BPIFB3P59826 476 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 CXCR4P61073 352 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 UBA52P62987 128 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 ACTG1P63261 375 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 EGR3Q06889 387 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 POU4F2Q12837 409 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 SIGLECL1Q8N7X8 197 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 PNLDC1Q8NA58 520 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 SCCPDHQ8NBX0 429 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 OR8J1Q8NGP2 316 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 PIGCQ92535 297 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 RNF170Q96K19 258 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 HIST1H2AAQ96QV6 131 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 RBM4BQ9BQ04 359 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 MS4A7Q9GZW8 240 aaPredicted RBP12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 GPR84Q9NQS5 396 aa12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 WARS2Q9UGM6 360 aaKnown RBP12.34□□□□□ -0.43
SMIM11A-203ENST00000399299 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 IGHV3OR15-7A0A075B7D8 119 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 TMEM89A2RUT3 159 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 ZNF879B4DU55 563 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 LOC110117498-PIK3R3F6TDL0 507 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 DVL1O14640 695 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 GPR37O15354 613 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 TMPRSS2O15393 492 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 POLR2IP36954 125 aaKnown RBP12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 MTNR1AP48039 350 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 FGF12P61328 243 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 GNG3P63215 75 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 MFGE8Q08431 387 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 RIPPLY1Q0D2K3 151 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 TMED1Q13445 227 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 WDR38Q5JTN6 314 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 C12orf54Q6X4T0 127 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 SLC36A1Q7Z2H8 476 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 BCL6BQ8N143 479 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 OR51E1Q8TCB6 317 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 PYDC1Q8WXC3 89 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 DMRTB1Q96MA1 342 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 ZNF48Q96MX3 618 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 TTTY10Q9BZA0 68 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 FGF23Q9GZV9 251 aaPredicted RBP12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 DNTTIP1Q9H147 329 aa12.33□□□□□ -0.44
SMIM11A-203ENST00000399299 SAC3D1A6NKF1 404 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 OR5B21A6NL26 309 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 P2RY10O00398 339 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 MTRF1O75570 445 aaKnown RBP12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 FCN3O75636 299 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 DHRS3O75911 302 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 TTRP02766 147 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 MMP9P14780 707 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 PRTN3P24158 256 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 HTR1FP30939 366 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 CEACAM21Q3KPI0 293 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 ATPAF1Q5TC12 328 aaPredicted RBP12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 STUMQ69YW2 141 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 ZFP1Q6P2D0 407 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 Q6ZSR3 168 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 KCTD8Q6ZWB6 473 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 THAP5Q7Z6K1 395 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 COMMD2Q86X83 199 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 ELMOD2Q8IZ81 293 aa12.32□□□□□ -0.44
SMIM11A-203ENST00000399299 OR5A2Q8NGI9 324 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms