RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NFYBP25208 207 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PTGFRP43088 359 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF92Q03936 586 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 BRICD5Q6PL45 260 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 SCARF2Q96GP6 870 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 RNF32Q9H0A6 362 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 FAM234AQ9H0X4 552 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 WDR54Q9H977 334 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PLEKHA2Q9HB19 425 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 SLC23A1Q9UHI7 598 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PSME4Q14997 1843 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 MEOX1P50221 254 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 RAB4BP61018 213 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PRSS53Q2L4Q9 553 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR52B4Q8NGK2 314 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF721Q8TF20 911 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 CT55Q8WUE5 264 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 KISS1RQ969F8 398 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PRSS27Q9BQR3 290 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 GPR87Q9BY21 358 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 RAB33BQ9H082 229 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 ACSM4P0C7M7 580 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 HIST1H1DP16402 221 aaKnown RBP12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 BAXQ07812 192 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 GAB4Q2WGN9 574 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 TMEM268Q5VZI3 342 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF774Q6NX45 483 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 GALNT16Q8N428 558 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 PFDN5Q99471 154 aa12.68□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR4C45A6NMZ5 311 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 AKR7A2O43488 359 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF354AO60765 605 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 BGLAPP02818 100 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 IL3RAP26951 378 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 PIGPP57054 158 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 GNG3P63215 75 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 HNF4GQ14541 408 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR52W1Q6IF63 320 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 H2BFWTQ7Z2G1 175 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 FAM185AQ8N0U4 392 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZDHHC22Q8N966 263 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 PPP1R1CQ8WVI7 109 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 AQP7P3A6NL99 342 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 CRYABP02511 175 aaKnown RBP12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 GP1BAP07359 652 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 NDUFB7P17568 137 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 UBE2KP61086 200 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 LSM6P62312 80 aaKnown RBP12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 NLRC3Q7RTR2 1065 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 KCNRGQ8N5I3 272 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR1J1Q8NGS3 322 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 WDR89Q96FK6 387 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 SF3B5Q9BWJ5 86 aaKnown RBP12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 KCNIP2Q9NS61 270 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 PUS1Q9Y606 427 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 ARPC4-TTLL3A0A0A6YYG9 625 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 M0R296 226 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 IGKV1D-16P01601 117 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 HPNP05981 417 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 AKR1C1Q04828 323 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 FUT5Q11128 374 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 HES3Q5TGS1 186 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 PMS2CLQ68D20 193 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 DGAT2L6Q6ZPD8 337 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 CPEB3Q8NE35 698 aaKnown RBP12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 LFNGQ8NES3 379 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 YIPF5Q969M3 257 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 SVILO95425 2214 aa12.67□□□□□ -0.38
PCDHGA11-201ENST00000398587 E5RGE8 158 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 CYC1P08574 325 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 PABPC1L2AQ5JQF8 200 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 DUSP18Q8NEJ0 188 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 SLC30A7Q8NEW0 376 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 FRRS1LQ9P0K9 344 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 NSG2Q9Y328 171 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 LRP3O75074 770 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 NGFRP08138 427 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 TRIP6Q15654 476 aaKnown RBP12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 S100A7AQ86SG5 101 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 TMED6Q8WW62 240 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 ST8SIA4Q92187 359 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 EXTL1Q92935 676 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 GDF15Q99988 308 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 OIP5O43482 229 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 RPL12P30050 165 aaKnown RBP12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 CST9LP1Q5W188 147 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 B3GNTL1Q67FW5 361 aaPredicted RBP12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 TRILQ7L0X0 811 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 DEFB124Q8NES8 71 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR52N4Q8NGI2 321 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 ALPK2Q86TB3 2170 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 DNAJC13O75165 2243 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 SMIM10L1P0DMW3 83 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 EIF2S3LQ2VIR3 472 aaKnown RBP12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 BAP18Q8IXM2 172 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 OR2G3Q8NGZ4 309 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 SMIM10Q96HG1 83 aa12.66□□□□□ -0.38
PCDHGA11-201ENST00000398587 ARHGAP5-AS1Q96IT6 56 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms