RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PAX5Q02548 391 aa13.36□□□□□ -0.27
CYLD-202ENST00000398568 ALG10Q5BKT4 473 aa13.36□□□□□ -0.27
CYLD-202ENST00000398568 ZCCHC10Q8TBK6 192 aa13.36□□□□□ -0.27
CYLD-202ENST00000398568 ANKRD9Q96BM1 317 aaPredicted RBP13.36□□□□□ -0.27
CYLD-202ENST00000398568 GINS3Q9BRX5 216 aa13.36□□□□□ -0.27
CYLD-202ENST00000398568 CXorf51AA0A1B0GTR3 108 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 KNG1P01042 644 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 EPHA1P21709 976 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 ACAA2P42765 397 aaKnown RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 ALDH3B1P43353 468 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 SPEM2Q0P670 501 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 HERPUD1Q15011 391 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 LINC01555Q8NAE3 123 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 OR1P1Q8NH06 330 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 OR8B4Q96RC9 309 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 SUSD2Q9UGT4 822 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 FOXD3Q9UJU5 478 aaPredicted RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 C14orf166Q9Y224 244 aaKnown RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 A6NIZ1 184 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 ZNF264O43296 627 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 TK1P04183 234 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 RAP1BP61224 184 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 SUPT4H1P63272 117 aaKnown RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 ARSJQ5FYB0 599 aaPredicted RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 ASPHD2Q6ICH7 369 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 MRPL41Q8IXM3 137 aaKnown RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 OR4D6Q8NGJ1 314 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 AMELYQ99218 206 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 ARV1Q9H2C2 271 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 Q9N2J8 555 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 APOBEC3BQ9UH17 382 aaKnown RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 HHLA2Q9UM44 414 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 IGKV1-8A0A0C4DH67 115 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 A6NNC1 897 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 E5RGE8 158 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 HSPA12AO43301 675 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 CST2P09228 141 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 PGA3P0DJD8 388 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 PNLIPP16233 465 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 GNALP38405 381 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 FAM185AQ8N0U4 392 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 NKAIN3Q8N8D7 197 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 OR52E1Q8NGJ3 308 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.35□□□□□ -0.27
CYLD-202ENST00000398568 NSG2Q9Y328 171 aa13.35□□□□□ -0.27
CYLD-202ENST00000398568 CLDN34H7C241 214 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 PLXNA2O75051 1894 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 IL18BPO95998 194 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 SRP19P09132 144 aaKnown RBP13.34□□□□□ -0.27
CYLD-202ENST00000398568 FSTP19883 344 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 GLRA1P23415 457 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 ENPP2Q13822 863 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 FDX2Q6P4F2 183 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 PLXDC2Q6UX71 529 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 DNAJA3Q96EY1 480 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 C5orf34Q96MH7 638 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 RPP25Q9BUL9 199 aaKnown RBP13.34□□□□□ -0.27
CYLD-202ENST00000398568 SLC46A2Q9BY10 475 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 SH3BGRL3Q9H299 93 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 SPHK2Q9NRA0 654 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 WSB1Q9Y6I7 421 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 VPS13AQ96RL7 3174 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 B4DEV8 164 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 MRPS11P82912 194 aaKnown RBP13.34□□□□□ -0.27
CYLD-202ENST00000398568 NFATC4Q14934 902 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 C1orf100Q5SVJ3 147 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 VITQ6UXI7 678 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 OR2A1Q8NGT9 310 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 RCC1LQ96I51 464 aaKnown RBP13.34□□□□□ -0.27
CYLD-202ENST00000398568 CPMP14384 443 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 AMY2BP19961 511 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 RND3P61587 244 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 HLA-DRB3P79483 266 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 SQSTM1Q13501 440 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 ZAR1Q86SH2 424 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 OTOSQ8NHW6 89 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 NEK7Q8TDX7 302 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 CYB5D2Q8WUJ1 264 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
CYLD-202ENST00000398568 DNAJB12Q9NXW2 375 aaKnown RBP13.34□□□□□ -0.27
CYLD-202ENST00000398568 MRPS18CQ9Y3D5 142 aaKnown RBP13.34□□□□□ -0.27
CYLD-202ENST00000398568 TMEM265A0A087WTH1 108 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 CHRM2P08172 466 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 VAX1Q5SQQ9 334 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 OTPQ5XKR4 325 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 SLC18B1Q6NT16 456 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 KCTD18Q6PI47 426 aaPredicted RBP13.33□□□□□ -0.28
CYLD-202ENST00000398568 LINC00114Q6XXX2 140 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 CYB561D1Q8N8Q1 229 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 TMEM18Q96B42 140 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 GPX7Q96SL4 187 aaPredicted RBP13.33□□□□□ -0.28
CYLD-202ENST00000398568 LPAR4Q99677 370 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 CABLES2Q9BTV7 478 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 CD207Q9UJ71 328 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 LIPGQ9Y5X9 500 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 NOTCH4Q99466 2003 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.28
CYLD-202ENST00000398568 TCF20Q9UGU0 1960 aaKnown RBP13.33□□□□□ -0.28
CYLD-202ENST00000398568 WIPF3A6NGB9 483 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms