RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 NPIPA5E9PKD4 350 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 GPR37O15354 613 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 NUDT21O43809 227 aaKnown RBP8.71□□□□□ -1.01
TRIM39-203ENST00000396547 BGLAPP02818 100 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 C1orf100Q5SVJ3 147 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 HLA-DQA1Q5Y7H0 255 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 OR5D14Q8NGL3 314 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 FAM213BQ8TBF2 198 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 MEGF10Q96KG7 1140 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 BMFQ96LC9 184 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 AQP10Q96PS8 301 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 RTBDNQ9BSG5 229 aaPredicted RBP8.71□□□□□ -1.01
TRIM39-203ENST00000396547 CNTNAP3Q9BZ76 1288 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 SEBOXQ9HB31 216 aaPredicted RBP8.71□□□□□ -1.01
TRIM39-203ENST00000396547 FAM86C1Q9NVL1 165 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 NPIPA1Q9UND3 350 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 TMEM184BQ9Y519 407 aaPredicted RBP8.71□□□□□ -1.01
TRIM39-203ENST00000396547 WDFY4Q6ZS81 3184 aa8.71□□□□□ -1.01
TRIM39-203ENST00000396547 PHF3Q92576 2039 aaKnown RBP8.71□□□□□ -1.01
TRIM39-203ENST00000396547 TRBV6-7A0A0A0MS04 114 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 RHPN2P1A8MT19 583 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 H3BML4 177 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 WRBO00258 174 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 CST4P01036 141 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 IFNA17P01571 189 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 PET100P0DJ07 73 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 PRF1P14222 555 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF708P17019 499 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 FBXW4P57775 412 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 POU3F1Q03052 451 aaPredicted RBP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 NFATC4Q14934 902 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 PNLIPRP3Q17RR3 467 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 CHRFAM7AQ494W8 412 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 C4orf17Q53FE4 359 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 PHF19Q5T6S3 580 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 ZNF343Q6P1L6 599 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 FAHD2BQ6P2I3 314 aaPredicted RBP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 FDX2Q6P4F2 183 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 PEG10Q86TG7 708 aaKnown RBP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 GKN2Q86XP6 184 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 WDFY1Q8IWB7 410 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 FAHD2AQ96GK7 314 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 RARRES2Q99969 163 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 TMEM59Q9BXS4 323 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 SH3BGRL3Q9H299 93 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 TXNIPQ9H3M7 391 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 TMPRSS5Q9H3S3 457 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 RNF122Q9H9V4 155 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 MEMO1Q9Y316 297 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 TIMM10BQ9Y5J6 103 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 LAMA1P25391 3075 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 AHSA1O95433 338 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 CD37P11049 281 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 ROM1Q03395 351 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 SPEM2Q0P670 501 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 TOMM20Q15388 145 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 PRTGQ2VWP7 1150 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 TSPO2Q5TGU0 170 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 RPUSD3Q6P087 351 aaKnown RBP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 SHISA6Q6ZSJ9 500 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 FNDC9Q8TBE3 224 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 MRPL24Q96A35 216 aaKnown RBP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 CLDN23Q96B33 292 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 SGK3Q96BR1 496 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 LPAR5Q9H1C0 372 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 PRODH2Q9UF12 536 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 C14orf166Q9Y224 244 aaKnown RBP8.71□□□□□ -1.02
TRIM39-203ENST00000396547 VDAC3Q9Y277 283 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 B3GALT1Q9Y5Z6 326 aa8.71□□□□□ -1.02
TRIM39-203ENST00000396547 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 M0R296 226 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 TNFSF12O43508 249 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 TTRP02766 147 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 GIMD1P0DJR0 217 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 FOLR2P14207 255 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 OMGP23515 440 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 HSD11B1P28845 292 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 BLVRBP30043 206 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-203ENST00000396547 CDAP32320 146 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 GPX4P36969 197 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-203ENST00000396547 TMEM50BP56557 158 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 FXYD4P59646 89 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 ACY1Q03154 408 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 PYY3Q5JQD4 70 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 C1orf140Q5VVS0 124 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 TMEM182Q6ZP80 229 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-203ENST00000396547 Q6ZSR6 202 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 HIST2H3AQ71DI3 136 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 NKAIN3Q8N8D7 197 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 DTWD2Q8NBA8 298 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 POC1AQ8NBT0 407 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 SLAMF6Q96DU3 332 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 PBOV1Q9GZY1 135 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 SHISA7A6NL88 538 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 CTSEP14091 401 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 HOXB2P14652 356 aa8.7□□□□□ -1.02
TRIM39-203ENST00000396547 PPP1CCP36873 323 aaKnown RBP8.7□□□□□ -1.02
TRIM39-203ENST00000396547 HHEXQ03014 270 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms