RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PRKACBP22694 351 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 SORDQ00796 357 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 PRDX4Q13162 271 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 SNTB1Q13884 538 aaKnown RBP17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 ZNF718Q3SXZ3 478 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 SPANXN2Q5MJ10 180 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 XKRXQ6PP77 449 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 OR51D1Q8NGF3 324 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 SSC4DQ8WTU2 575 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 HAVCR1Q96D42 359 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 DIRAS2Q96HU8 199 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 OR5V1Q9UGF6 321 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 GPR160Q9UJ42 338 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 SLC7A11Q9UPY5 501 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 FAM230AA0A1W2PPH8 454 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 ATP6V1G2-DDX39BF2Z307 99 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 GCH1P30793 250 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 MPV17P39210 176 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 SCAND1P57086 179 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 PSG7Q13046 419 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 ZNF846Q147U1 533 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 KISS1Q15726 138 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 RGS7BPQ6MZT1 257 aaPredicted RBP17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 CCDC190Q86UF4 302 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 OR4D6Q8NGJ1 314 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 SLC25A28Q96A46 364 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 FAM3DQ96BQ1 224 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 BORCS8Q96FH0 119 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 WDR12Q9GZL7 423 aaKnown RBP17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 CRIM1Q9NZV1 1036 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 ETV7Q9Y603 341 aa17.52■□□□□ 0.4
VCPKMT-202ENST00000395860 DPRXA6NFQ7 191 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 C1QL1O75973 258 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 CLDN14O95500 239 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 ARSBP15848 533 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 AGAP20933 346 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 FABP6P51161 128 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 KRT74Q7RTS7 529 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 RNF144BQ7Z419 303 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 LRRC28Q86X40 367 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 ZDHHC23Q8IYP9 409 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 PNLDC1Q8NA58 520 aaKnown RBP17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 LINC01560Q8TB33 94 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 ITLN2Q8WWU7 325 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 CPNE2Q96FN4 548 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 IQCF6A8MYZ5 107 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 ABCD4O14678 606 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 LILRA1O75019 489 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 ELK1P19419 428 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 GLRXP35754 106 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 POU3F4P49335 361 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 FUT6P51993 359 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 ZNF45Q02386 682 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 BSPH1Q075Z2 132 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 RIN1Q13671 783 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 C2orf76Q3KRA6 126 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 UBE2NLQ5JXB2 153 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 MBNL2Q5VZF2 373 aaKnown RBP17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 AWAT2Q6E213 333 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 LHFPL2Q6ZUX7 228 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 MFSD4AQ8N468 514 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 ZNF808Q8N4W9 903 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 RFT1Q96AA3 541 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 CMTM3Q96MX0 182 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 MRPL15Q9P015 296 aaKnown RBP17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 FZR1Q9UM11 496 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 MPC1Q9Y5U8 109 aa17.51■□□□□ 0.39
VCPKMT-202ENST00000395860 LOC100289279A0A1B0GTE1 492 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 EIF4EP06730 217 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 ETV6P41212 452 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 RANBP1P43487 201 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 RBP2P50120 134 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 MTCP1P56278 107 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 RPS23P62266 143 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 NKX6-1P78426 367 aaPredicted RBP17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 TFF3Q07654 80 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 CNIH2Q6PI25 160 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 ANGPTL5Q86XS5 388 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 HIST1H2AAQ96QV6 131 aa17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 PURGQ9UJV8 347 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 MRPS28Q9Y2Q9 187 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-202ENST00000395860 HIVEP3Q5T1R4 2406 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 TUBAL3A6NHL2 446 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 APOA1P02647 267 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 OR3A4PP47883 348 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 EVX1P49640 407 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 CAPZA1P52907 286 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 ATP1B3P54709 279 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 CEACAM21Q3KPI0 293 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 VHLLQ6RSH7 139 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 OR5D18Q8NGL1 313 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 KCNK15Q9H427 330 aa17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 ESRP2Q9H6T0 727 aaKnown RBP17.49■□□□□ 0.39
VCPKMT-202ENST00000395860 TIMM8AO60220 97 aaPredicted RBP17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 KITLGP21583 273 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 CA6P23280 308 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 TALDO1P37837 337 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 ALKBH6Q3KRA9 238 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 CRIP3Q6Q6R5 217 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms