RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 CCDC54Q8NEL0 328 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR2D3Q8NGH3 330 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR5M1Q8NGP8 315 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR4S2Q8NH73 311 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR6X1Q8NH79 312 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR5AK3PQ8NH89 298 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 FAM172AQ8WUF8 416 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 AP3S1Q92572 193 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 APH1AQ96BI3 265 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 RNF145Q96MT1 663 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 UTP23Q9BRU9 249 aaKnown RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 RSG1Q9BU20 258 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 PORCNQ9H237 461 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 NANOGQ9H9S0 305 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 HRASLSQ9HDD0 168 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 BABAM2Q9NXR7 383 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 NXT1Q9UKK6 140 aaKnown RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 PSG8Q9UQ74 426 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 TBL2Q9Y4P3 447 aaKnown RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 WIF1Q9Y5W5 379 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 MN1Q10571 1320 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 LTBP4Q8N2S1 1624 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 RAB3GAP2Q9H2M9 1393 aa3.37□□□□□ -1.87
HMGB1P10-201ENST00000395823 VPS37CA5D8V6 355 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 EFCAB10A6NFE3 127 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 H7C0C1 242 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 ACOX3O15254 700 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 TNFAIP8O95379 198 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 KLK1P06870 262 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 RHOCP08134 193 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZDHHC11BP0C7U3 371 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CD36P16671 472 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 PSMC3P17980 439 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 IVDP26440 423 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CRABP2P29373 138 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CXCL5P42830 114 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 RANBP1P43487 201 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 LHX2P50458 406 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 XKP51811 444 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF136P52737 540 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 UBE2KP61086 200 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CCL7P80098 99 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 TMEM183BQ1AE95 376 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CCDC58Q4VC31 144 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 RBM48Q5RL73 367 aaKnown RBP3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 DNAJC24Q6P3W2 148 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF530Q6P9A1 599 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 NPSR1Q6W5P4 371 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 C12orf54Q6X4T0 127 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 LINC00336Q6ZUF6 198 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 MBOAT2Q6ZWT7 520 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 H2AFVQ71UI9 128 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 TMEM183AQ8IXX5 376 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 PGAM4Q8N0Y7 254 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 Q8N402 240 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 LINC01555Q8NAE3 123 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR10AD1Q8NGE0 317 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 IFT81Q8WYA0 676 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CCDC42Q96M95 316 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 PACRGQ96M98 296 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 PRRT1Q99946 306 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 TRIM4Q9C037 500 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 ING2Q9H160 280 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 LHX5Q9H2C1 402 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CDC42EP4Q9H3Q1 356 aaKnown RBP3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 DDX19AQ9NUU7 478 aaKnown RBP3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 FGFR1OP2Q9NVK5 253 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 PLEKHJ1Q9NW61 149 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 NYAP2Q9P242 653 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF337Q9Y3M9 751 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 CCDC180Q9P1Z9 1646 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 ADGRL3Q9HAR2 1447 aa3.36□□□□□ -1.87
HMGB1P10-201ENST00000395823 A0A1W2PQL4 384 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 SULT1C2O00338 296 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 GABRPO00591 440 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 PLPP1O14494 284 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 SS18L1O75177 396 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 SC5DO75845 299 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 PLEKHA8P1O95397 391 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 EIF4EP06730 217 aaKnown RBP3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 GP1BAP07359 652 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 CBR1P16152 277 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 RBM34P42696 430 aaKnown RBP3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 MAGEA12P43365 314 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 SPCS3P61009 180 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 PRR3P79522 188 aaKnown RBP3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 C2orf54Q08AI8 447 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 MGAT3Q09327 533 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 FLOT2Q14254 428 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZCWPW2Q504Y3 356 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 PDZD11Q5EBL8 140 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 ADNP2Q6IQ32 1131 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF547Q8IVP9 402 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 HS3ST5Q8IZT8 346 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 TMEM251Q8N6I4 163 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 NPWQ8N729 165 aa3.35□□□□□ -1.87
HMGB1P10-201ENST00000395823 OR52E2Q8NGJ4 325 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms